RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 DPCDQ9BVM2 203 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-216ENST00000641375 PRORYQ9H606 182 aa13.94□□□□□ -0.18
PHGDH-216ENST00000641375 HEXA-AS1Q9H8Q6 139 aa13.94□□□□□ -0.18
PHGDH-216ENST00000641375 NCOR2Q9Y618 2525 aa13.94□□□□□ -0.18
PHGDH-216ENST00000641375 SPTA1P02549 2419 aa13.94□□□□□ -0.18
PHGDH-216ENST00000641375 OR5H14A6NHG9 310 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 ZNF44P15621 663 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 CD34P28906 385 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 CA7P43166 264 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 ZNF660Q6AZW8 331 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-216ENST00000641375 ADAD2Q8NCV1 583 aaKnown RBP13.93□□□□□ -0.18
PHGDH-216ENST00000641375 TMEM171Q8WVE6 324 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 PHB2Q99623 299 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 WDR13Q9H1Z4 485 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 HES4Q9HCC6 221 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 DECR2Q9NUI1 292 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 CHD8Q9HCK8 2581 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 IGLV3-9A0A075B6K5 115 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 TRAV24A0A0B4J272 114 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 PLSCR5A0PG75 271 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 A6NLC8 198 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 POM121CA8CG34 1229 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 HSPB6O14558 160 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 GOSR2O14653 212 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 HS3ST1O14792 307 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 SH2D1BO14796 132 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 SLC34A2O95436 690 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 DUS4LO95620 317 aaKnown RBP13.93□□□□□ -0.18
PHGDH-216ENST00000641375 PPP3CBP16298 524 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 VAMP1P23763 118 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 DNASE1P24855 282 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 MDH2P40926 338 aaKnown RBP13.93□□□□□ -0.18
PHGDH-216ENST00000641375 DHODHQ02127 395 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 C11orf53Q8IXP5 236 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 NUP37Q8NFH4 326 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 MITD1Q8WV92 249 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 CHIAQ9BZP6 476 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 Q9N2K0 584 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 TREM2Q9NZC2 230 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 C14orf166Q9Y224 244 aaKnown RBP13.93□□□□□ -0.18
PHGDH-216ENST00000641375 CADP27708 2225 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 PCNX1Q96RV3 2341 aa13.93□□□□□ -0.18
PHGDH-216ENST00000641375 KIR2DS1A0A191URI9 304 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 FOSL1P15407 271 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 KIR2DS4P43632 304 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 KIR2DS1Q14954 304 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 LPCAT3Q6P1A2 487 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 Q6P435 159 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 RDH5Q92781 318 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 PIPOXQ9P0Z9 390 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 UBQLN2Q9UHD9 624 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 TRBV6-6A0A0A6YYG2 114 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 IGHV3-64DA0A0J9YX35 117 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 H7C1Q1 480 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 CD200P41217 278 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 GLP1RP43220 463 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 MSMPQ1L6U9 139 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 LIN54Q6MZP7 749 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 VHLLQ6RSH7 139 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 Q6ZPA2 131 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 LRP11Q86VZ4 500 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 OR2Z1Q8NG97 314 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 RTBDNQ9BSG5 229 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-216ENST00000641375 SHARPINQ9H0F6 387 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 MGAT4AQ9UM21 535 aa13.92□□□□□ -0.18
PHGDH-216ENST00000641375 CACNA1AO00555 2505 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 OR2H2O95918 312 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 PGAM2P15259 253 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 H2BFSP57053 126 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 RAB14P61106 215 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 WDR82Q6UXN9 313 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 WFDC8Q8IUA0 241 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 CLEC4MQ9H2X3 399 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-216ENST00000641375 ATP23Q9Y6H3 246 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 SHANK1Q9Y566 2161 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 POLEQ07864 2286 aa13.91□□□□□ -0.18
PHGDH-216ENST00000641375 RGS11O94810 467 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 PTBP3O95758 552 aaKnown RBP13.9□□□□□ -0.18
PHGDH-216ENST00000641375 BTN1A1Q13410 526 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 C2orf68Q2NKX9 166 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 PAN3Q58A45 887 aaKnown RBP13.9□□□□□ -0.18
PHGDH-216ENST00000641375 PRAMEF6Q5VXH4 476 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 SYT3Q9BQG1 590 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 NGBQ9NPG2 151 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 OPN4Q9UHM6 478 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 PRELID3BQ9Y3B1 194 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 TMEM8BA6NDV4 472 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 SLC33A1O00400 549 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-216ENST00000641375 B3GALNT1O75752 331 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 CTXN2P0C2S0 81 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 ASCL1P50553 236 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 ZNF826PQ6ZT77 177 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 MRPL30Q8TCC3 161 aaKnown RBP13.9□□□□□ -0.18
PHGDH-216ENST00000641375 TMEM230Q96A57 120 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 UFSP2Q9NUQ7 469 aa13.9□□□□□ -0.18
PHGDH-216ENST00000641375 hCG_1807616A0A1W2PRN6 198 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 TRDCB7Z8K6 153 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 SNAPC5O75971 98 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 THBDP07204 575 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 CTSDP07339 412 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms