RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 LIN7BQ9HAP6 207 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 OR6C3Q9NZP0 311 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 RPL36Q9Y3U8 105 aaKnown RBP11.12□□□□□ -0.63
LINC00339-211ENST00000641009 A0A087X0M5 115 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 TRAV24A0A0B4J272 114 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 KBTBD11-OT1A0A1B0GTJ5 212 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 A0A1B0GX30 115 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
LINC00339-211ENST00000641009 MAGEB3O15480 346 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 IGHV3-7P01780 117 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 LPLP06858 475 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 RPSAP08865 295 aaKnown RBP11.12□□□□□ -0.63
LINC00339-211ENST00000641009 RAB3AP20336 220 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 GLP1RP43220 463 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 OR3A4PP47883 348 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 ARHGDIBP52566 201 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 PIGYQ3MUY2 71 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 ABCA11PQ4W5N1 156 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 PAN3Q58A45 887 aaKnown RBP11.12□□□□□ -0.63
LINC00339-211ENST00000641009 ELP2Q6IA86 826 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 ZNF529Q6P280 563 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 C10orf67Q8IYJ2 551 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 PXT1Q8NFP0 134 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 OR4F17Q8NGA8 305 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 OR13A1Q8NGR1 328 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 TNFAIP8L1Q8WVP5 186 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 CAPSLQ8WWF8 208 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 LEAP2Q969E1 77 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 KIRREL1Q96J84 757 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 AKR1E2Q96JD6 320 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 OR4F4Q96R69 305 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 JAM3Q9BX67 310 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 KIF25Q9UIL4 384 aa11.12□□□□□ -0.63
LINC00339-211ENST00000641009 MEIKINA0A087WXM9 373 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 LY6LH3BQJ8 138 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 XPNPEP2O43895 674 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 WBP4O75554 376 aaKnown RBP11.11□□□□□ -0.63
LINC00339-211ENST00000641009 CGB3P0DN86 165 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 CGB7P0DN87 165 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 CEACAM3P40198 252 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 ETV1P50549 477 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 PRRX1P54821 245 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 KLHL22Q53GT1 634 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 CENPVQ7Z7K6 275 aaPredicted RBP11.11□□□□□ -0.63
LINC00339-211ENST00000641009 CNIH3Q8TBE1 160 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 CREB3L1Q96BA8 519 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
LINC00339-211ENST00000641009 FGF20Q9NP95 211 aaPredicted RBP11.11□□□□□ -0.63
LINC00339-211ENST00000641009 CALYQ9NYX4 217 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 ZNF581Q9P0T4 197 aa11.11□□□□□ -0.63
LINC00339-211ENST00000641009 OR2F2O95006 317 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 BAG2O95816 211 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 AMY1AP04745 511 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 AMY2AP04746 511 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 CD83Q01151 205 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 IL13RA2Q14627 380 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 RSU1Q15404 277 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 LTC4SQ16873 150 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 OR2G6Q5TZ20 316 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 ZNF565Q8N9K5 539 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 OR9G1Q8NH87 305 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 PLPPR1Q8TBJ4 325 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 HAVCR2Q8TDQ0 301 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 GPR148Q8TDV2 347 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 CPNE2Q96FN4 548 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-211ENST00000641009 SIRT4Q9Y6E7 314 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-211ENST00000641009 COL7A1Q02388 2944 aa11.1□□□□□ -0.63
LINC00339-211ENST00000641009 TRAV39A0A0B4J263 110 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 CDRT1O95170 752 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 HTR3BO95264 441 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 CLIC3O95833 236 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 MNDAP41218 407 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 RSBN1Q5VWQ0 802 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-211ENST00000641009 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 RPL22L1Q6P5R6 122 aaKnown RBP11.09□□□□□ -0.63
LINC00339-211ENST00000641009 C10orf99Q6UWK7 81 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 Q6ZPA2 131 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 ZNF555Q8NEP9 628 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 RFESDQ8TAC1 157 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 MRGPRDQ8TDS7 321 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 TMEM106AQ96A25 262 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 RPEQ96AT9 228 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 BARHL1Q9BZE3 327 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 SMPD3Q9NY59 655 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-211ENST00000641009 IDI2-AS1Q9NZ38 188 aa11.09□□□□□ -0.63
LINC00339-211ENST00000641009 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-211ENST00000641009 OOSP1A8MZH6 123 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 J3QR06 171 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 IL1AP01583 271 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 CD2P06729 351 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 C21orf33P30042 268 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-211ENST00000641009 SSTR5P35346 364 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 GNG10P50151 68 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 DIAPH2-AS1Q14236 149 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 CCDC58Q4VC31 144 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 C9orf152Q5JTZ5 239 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 ASCL4Q6XD76 172 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 Q8NFD4 153 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms