RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 FAM216BQ8N7L0 139 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 ZNRF1Q8ND25 227 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 OR5D13Q8NGL4 314 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 CLDND2Q8NHS1 167 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 C8orf46Q8TAG6 207 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 RAB3CQ96E17 227 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 NEIL1Q96FI4 390 aaPredicted RBP7.56□□□□□ -1.2
SCARB2-225ENST00000640900 COQ2Q96H96 371 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 DMRTB1Q96MA1 342 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 SULT4A1Q9BR01 284 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 C6orf62Q9GZU0 229 aaPredicted RBP7.56□□□□□ -1.2
SCARB2-225ENST00000640900 ATG5Q9H1Y0 275 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 AUNIPQ9H7T9 357 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 LINC00574Q9H8X3 128 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 AKIP1Q9NQ31 210 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 RABL2AQ9UBK7 228 aaPredicted RBP7.56□□□□□ -1.2
SCARB2-225ENST00000640900 ANAPC10Q9UM13 185 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 RABL2BQ9UNT1 228 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 DOCK11Q5JSL3 2073 aa7.56□□□□□ -1.2
SCARB2-225ENST00000640900 SIRPB1O00241 398 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 DVL1O14640 695 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 MGST3O14880 152 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 TMPRSS2O15393 492 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 ADAM20O43506 726 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 SSX5O60225 188 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 MT-ND4P03905 459 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 GNB3P16520 340 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 GABRA2P47869 451 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 NPY4RP50391 375 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 TAS2R20P59543 309 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 LSAMPQ13449 338 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 ARL6IP1Q15041 203 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 ZNF79Q15937 498 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 SRSF7Q16629 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCARB2-225ENST00000640900 PNLIPRP3Q17RR3 467 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 CDNFQ49AH0 187 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 WDR25Q64LD2 544 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-225ENST00000640900 SLC35E4Q6ICL7 350 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 BAIAP2L2Q6UXY1 529 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 Q6ZS49 121 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 TCF23Q7RTU1 214 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 LY6G5BQ8NDX9 201 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 PLPPR1Q8TBJ4 325 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 CORO2AQ92828 525 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 ABHD1Q96SE0 405 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 FAAP24Q9BTP7 215 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 DIABLOQ9NR28 239 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 OR14J1Q9UGF5 321 aa7.55□□□□□ -1.2
SCARB2-225ENST00000640900 FLNAP21333 2647 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 TRAV18A0A075B6X5 111 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 TRBV23-1A0A0A0MS06 115 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 PPIAL4CA0A0B4J2A2 164 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 NKX6-3A6NJ46 265 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 MCRIP1C9JLW8 97 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 SULT1C2O00338 296 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 RGS5O15539 181 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 ZNF44P15621 663 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 RPS2P15880 293 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 NAT1P18440 290 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 USF1P22415 310 aaPredicted RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 IL2RGP31785 369 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 SNU13P55769 128 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 P2RX3P56373 397 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 SEC61A1P61619 476 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 RELBQ01201 579 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 RBM39Q14498 530 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 CARTPTQ16568 116 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 PAN3Q58A45 887 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 OXLD1Q5BKU9 147 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 TMEM69Q5SWH9 247 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 OLFML2AQ68BL7 652 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 FGFRL1Q8N441 504 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 BPIFB2Q8N4F0 458 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 WFDC11Q8NEX6 87 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 OR8B3Q8NGG8 313 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 PPP1R35Q8TAP8 253 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 MRPL30Q8TCC3 161 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 GPX8Q8TED1 209 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 C15orf40Q8WUR7 153 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 DYRK2Q92630 601 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 DIRAS2Q96HU8 199 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 NEDD4LQ96PU5 975 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 OR8B2Q96RD0 313 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 SDHCQ99643 169 aaPredicted RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 REG4Q9BYZ8 158 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 PPA2Q9H2U2 334 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 RIMS4Q9H426 269 aaPredicted RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 SCPEP1Q9HB40 452 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 MBNL3Q9NUK0 354 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 PLEKHJ1Q9NW61 149 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 EXTL2Q9UBQ6 330 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 SLC25A10Q9UBX3 287 aaPredicted RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 AK3Q9UIJ7 227 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 ELF5Q9UKW6 265 aaPredicted RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 RBMX2Q9Y388 322 aaKnown RBP7.54□□□□□ -1.2
SCARB2-225ENST00000640900 CR1P17927 2039 aa7.54□□□□□ -1.2
SCARB2-225ENST00000640900 A0A0G2JMP0 313 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 A0A0X1KG70 313 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 ODAMA1E959 279 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms