RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 SFXN4Q6P4A7 337 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 CLEC18BQ6UXF7 455 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 LYPD6Q86Y78 171 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 ACBD4Q8NC06 268 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 CLEC18CQ8NCF0 446 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 SYNPRQ8TBG9 265 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 SSC4DQ8WTU2 575 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 FAM222BQ8WU58 562 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 PIGCQ92535 297 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 MRGPRFQ96AM1 343 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 TECTBQ96PL2 329 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 PRR25Q96S07 402 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 TMEM204Q9BSN7 226 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 MAGT1Q9H0U3 335 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 GAL3ST2Q9H3Q3 398 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 ZNF442Q9H7R0 627 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 GPR173Q9NS66 373 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 PLEKHB1Q9UF11 243 aaPredicted RBP6.75□□□□□ -1.33
SCARB2-220ENST00000640076 RPH3ALQ9UNE2 315 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 RNF115Q9Y4L5 304 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 V9GY05 133 aa6.75□□□□□ -1.33
SCARB2-220ENST00000640076 IGLV3-9A0A075B6K5 115 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 IFITM5A6NNB3 132 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 J3QKU1 62 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 AIPO00170 330 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 TIMM8AO60220 97 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-220ENST00000640076 IGHV3-13P01766 116 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 ALDOBP05062 364 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 DANCRP0C864 163 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 OCMP0CE72 109 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-220ENST00000640076 PRF1P14222 555 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 CA6P23280 308 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 CFPP27918 469 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 CNN1P51911 297 aaKnown RBP6.74□□□□□ -1.33
SCARB2-220ENST00000640076 KLF3P57682 345 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-220ENST00000640076 SSX2Q16385 188 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 PNLIPRP3Q17RR3 467 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 DDI2Q5TDH0 399 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 DCAF12L2Q5VW00 463 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 LRP11Q86VZ4 500 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 CROCCP3Q8IVE0 287 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 OR52N4Q8NGI2 321 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 NPRL2Q8WTW4 380 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 MRPL24Q96A35 216 aaKnown RBP6.74□□□□□ -1.33
SCARB2-220ENST00000640076 R3HDM4Q96D70 268 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 PIK3IP1Q96FE7 263 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 SPACA5Q96QH8 159 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 NKX3-1Q99801 234 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-220ENST00000640076 TMEM246Q9BRR3 403 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 GEMIN7Q9H840 131 aaKnown RBP6.74□□□□□ -1.33
SCARB2-220ENST00000640076 CHMP1AQ9HD42 196 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-220ENST00000640076 DAPK2Q9UIK4 370 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 POU2F3Q9UKI9 436 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 MPC1Q9Y5U8 109 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 LRBAP50851 2863 aa6.74□□□□□ -1.33
SCARB2-220ENST00000640076 AKAP6Q13023 2319 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 FUOMA2VDF0 154 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 E7EQL1 145 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 PLAUP00749 431 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 HCKP08631 526 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 SLC2A2P11168 524 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 ZNF93P35789 620 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 SUMO2P61956 95 aaKnown RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 FAM189A2Q15884 450 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 C1orf100Q5SVJ3 147 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 PRAMEF5Q5TYX0 476 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 PRAMEF6Q5VXH4 476 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 GLT8D1Q68CQ7 371 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 FAM166AQ6J272 317 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 ERASQ7Z444 233 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 JAGN1Q8N5M9 183 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 OR8G5Q8NG78 346 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 OR10Z1Q8NGY1 313 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 MCFD2Q8NI22 146 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 TRMT10AQ8TBZ6 339 aaKnown RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 DTD1Q8TEA8 209 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 HPSE2Q8WWQ2 592 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 CACNG8Q8WXS5 425 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 NEUROG1Q92886 237 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 HARBI1Q96MB7 349 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 ZNF48Q96MX3 618 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 NXF2Q9GZY0 626 aaKnown RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 METTL17Q9H7H0 456 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 MYEF2Q9P2K5 600 aaKnown RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 TBC1D24Q9ULP9 559 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 A3GALT2U3KPV4 340 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 ARFGEF3Q5TH69 2177 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 FASNP49327 2511 aaKnown RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 DOPEY2Q9Y3R5 2298 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 CACNA1DQ01668 2161 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 PRSS44E7EML9 344 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 SLC17A2O00624 439 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 FABP1P07148 127 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 OR4A8P0C604 315 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 SPP1P10451 314 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 MMP15P51511 669 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 FUT6P51993 359 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 DAZAP2Q15038 168 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-220ENST00000640076 KISS1Q15726 138 aa6.73□□□□□ -1.33
SCARB2-220ENST00000640076 CEACAM21Q3KPI0 293 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms