RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 KLF3P57682 345 aaPredicted RBP1.63□□□□□ -2.15
CCDC7-216ENST00000640058 CD164Q04900 197 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 ZBTB6Q15916 424 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 MTERF4Q7Z6M4 381 aaKnown RBP1.63□□□□□ -2.15
CCDC7-216ENST00000640058 MARCH3Q86UD3 253 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 SPERTQ8NA61 448 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 PITX2Q99697 317 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 ZNF436Q9C0F3 470 aaPredicted RBP1.63□□□□□ -2.15
CCDC7-216ENST00000640058 TMBIM4Q9HC24 238 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 TRAPPC1Q9Y5R8 145 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 ICOSQ9Y6W8 199 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 CACNA1GO43497 2377 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 POLR3AO14802 1390 aaPredicted RBP1.62□□□□□ -2.15
CCDC7-216ENST00000640058 TRAV8-3A0A0A6YYJ7 113 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 LEUTXA8MZ59 168 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 TMEM250H0YL14 139 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 K7ERS5 55 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 POLR3GO15318 223 aaPredicted RBP1.62□□□□□ -2.15
CCDC7-216ENST00000640058 FADS2O95864 444 aaKnown RBP1.62□□□□□ -2.15
CCDC7-216ENST00000640058 IGKV1D-33P01593 117 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 IGKV1-33P01594 117 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 TPM3P06753 285 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 SCGB1C2P0DMR2 95 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 MAGEA3P43357 314 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 TRAM1Q15629 374 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 BSXQ3C1V8 233 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 TTMPQ5BVD1 217 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 LAMTOR1Q6IAA8 161 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 Q6ZQT7 251 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 Q6ZS52 159 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 PAGE2Q7Z2X7 111 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 SLC25A45Q8N413 288 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 LY6G5BQ8NDX9 201 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 OR6K3Q8NGY3 331 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 ACTL9Q8TC94 416 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 SCGB1C1Q8TD33 95 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 C2orf15Q8WU43 125 aaKnown RBP1.62□□□□□ -2.15
CCDC7-216ENST00000640058 RORBQ92753 470 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 OLFM3Q96PB7 478 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 DUSP21Q9H596 190 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 RHOFQ9HBH0 211 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 ASF1BQ9NVP2 202 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 C14orf166Q9Y224 244 aaKnown RBP1.62□□□□□ -2.15
CCDC7-216ENST00000640058 ZNF443Q9Y2A4 671 aaPredicted RBP1.62□□□□□ -2.15
CCDC7-216ENST00000640058 SNX24Q9Y343 169 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 FADS3Q9Y5Q0 445 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 ATRNO75882 1429 aa1.62□□□□□ -2.15
CCDC7-216ENST00000640058 EIF4G1Q04637 1599 aaKnown RBP1.62□□□□□ -2.15
CCDC7-216ENST00000640058 IGHV1-45A0A0A0MS14 117 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 IGHV2-26A0A0B4J1V2 119 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 A0A1B0GX12 115 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 RNASEK-C17orf49H0YIS7 233 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 K7ERQ8 282 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 M0QX08 132 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 M0QXV9 152 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 UBDO15205 165 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 BRI3O95415 125 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 YEATS4O95619 227 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 GTF2F2P13984 249 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 RPA3P35244 121 aaPredicted RBP1.61□□□□□ -2.15
CCDC7-216ENST00000640058 ZNF83P51522 516 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 AQP5P55064 265 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 CASP8Q14790 479 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 TRIP13Q15645 432 aaPredicted RBP1.61□□□□□ -2.15
CCDC7-216ENST00000640058 GOLGA7BQ2TAP0 167 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 CCDC122Q5T0U0 273 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 FAM183BPQ6ZVS7 135 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 MRPL52Q86TS9 123 aaKnown RBP1.61□□□□□ -2.15
CCDC7-216ENST00000640058 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.61□□□□□ -2.15
CCDC7-216ENST00000640058 MAL2Q969L2 176 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 OTUB2Q96DC9 234 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 LINC01587Q99440 93 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 B9D2Q9BPU9 175 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 CCDC94Q9BW85 323 aaPredicted RBP1.61□□□□□ -2.15
CCDC7-216ENST00000640058 SLC25A31Q9H0C2 315 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 ABCG5Q9H222 651 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 ENPP5Q9UJA9 477 aa1.61□□□□□ -2.15
CCDC7-216ENST00000640058 NACADO15069 1562 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 SPATA31E1Q6ZUB1 1445 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 SSH2Q76I76 1423 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 A0A1B0GU33 70 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 LINC00854A0A1B0GVQ3 168 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 H3BMM0 161 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 C3orf84H3BNL1 204 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 H3BP45 60 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 YKT6O15498 198 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 SGCEO43556 437 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 OR10A3P58181 314 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 HBG1P69891 147 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 HBG2P69892 147 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 SARNPP82979 210 aaKnown RBP1.6□□□□□ -2.15
CCDC7-216ENST00000640058 PRDX1Q06830 199 aaKnown RBP1.6□□□□□ -2.15
CCDC7-216ENST00000640058 DHRS2Q13268 280 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 STX3Q13277 289 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 ZNF141Q15928 474 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 FAM162BQ5T6X4 162 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 AHSA2Q719I0 299 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 CPNE9Q8IYJ1 553 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 Q8NAQ8 132 aa1.6□□□□□ -2.15
CCDC7-216ENST00000640058 Q8NDZ9 215 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms