RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 HAND1O96004 215 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 SEC61A1P61619 476 aaKnown RBP18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 BSPH1Q075Z2 132 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 ZNF146Q15072 292 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 ANKRD55Q3KP44 614 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 LGALSLQ3ZCW2 172 aaPredicted RBP18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 SCGB3A2Q96PL1 93 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 IFT22Q9H7X7 185 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 TAAR3PQ9P1P4 343 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 CACNA1AO00555 2505 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 PSPNO60542 156 aa18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 SLC34A2O95436 690 aa18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 PTBP3O95758 552 aaKnown RBP18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 CA7P43166 264 aa18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 TMEM108Q6UXF1 575 aa18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 ASCC1Q8N9N2 400 aaKnown RBP18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 UBALD1Q8TB05 177 aa18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 RHOFQ9HBH0 211 aa18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 TMEM165Q9HC07 324 aa18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 CHD3Q12873 2000 aaKnown RBP18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 POLEQ07864 2286 aa18.27■□□□□ 0.52
CHRNA7-228ENST00000637519 IGLV3-9A0A075B6K5 115 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 FAM90A27PA6NNH2 459 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 KALRNO60229 2985 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 ZNF728P0DKX0 622 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 EGR1P18146 543 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 SORDQ00796 357 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 SURF2Q15527 256 aaPredicted RBP18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 SPERTQ8NA61 448 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 LRRC29Q8WV35 223 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 WFIKKN1Q96NZ8 548 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 OR2V2Q96R30 315 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 PRORYQ9H606 182 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 DECR2Q9NUI1 292 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 METRNQ9UJH8 293 aa18.27■□□□□ 0.51
CHRNA7-228ENST00000637519 PLCE1Q9P212 2302 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 TPD52L2O43399 206 aaKnown RBP18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 ADAP1O75689 374 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 GLP1RP43220 463 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 ZNF81P51508 661 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 RBM39Q14498 530 aaKnown RBP18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 LRRC37A5PQ49AS3 106 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 PHLDA2Q53GA4 152 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 ADAM5Q6NVV9 412 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 ACP7Q6ZNF0 438 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 PDCD10Q9BUL8 212 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 PLSCR5A0PG75 271 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 SH2D1BO14796 132 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 CASP6P55212 293 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 BOLLQ8N9W6 283 aaKnown RBP18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 ST6GALNAC3Q8NDV1 305 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 OR11L1Q8NGX0 322 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 ATP23Q9Y6H3 246 aa18.26■□□□□ 0.51
CHRNA7-228ENST00000637519 NBASA2RRP1 2371 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 ICE1Q9Y2F5 2266 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 MED19A0JLT2 244 aaPredicted RBP18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 MPTX1A8MV57 137 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 TRDCB7Z8K6 153 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 CCL21O00585 134 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 PPYP01298 95 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 CTSDP07339 412 aaPredicted RBP18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 PIGPP57054 158 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 SPIN3Q5JUX0 258 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 Q6ZS49 121 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 PRR18Q8N4B5 295 aa18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 USB1Q9BQ65 265 aaKnown RBP18.25■□□□□ 0.51
CHRNA7-228ENST00000637519 FXYD6-FXYD2A0A087WZ82 144 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 TRAV14DV4A0A0A6YYC5 116 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 DBX1A6NMT0 343 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 RGS13O14921 159 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 MOGAT3Q86VF5 341 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 FAM219AQ8IW50 185 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 MOB3AQ96BX8 217 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 CLEC4MQ9H2X3 399 aaPredicted RBP18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 C13orf42A0A1B0GVH6 325 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 NKX2-6A6NCS4 301 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 RFPL4AA6NLU0 287 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 RFPL4AL1F8VTS6 287 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 CXCL2P19875 107 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 GRNP28799 593 aaKnown RBP18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 SERPINF1P36955 418 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 CD200P41217 278 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 RPS23P62266 143 aaKnown RBP18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 CDSNQ15517 529 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 ITLN1Q8WWA0 313 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 MEGF10Q96KG7 1140 aa18.24■□□□□ 0.51
CHRNA7-228ENST00000637519 ACAA1P09110 424 aaPredicted RBP18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 PTAFRP25105 342 aa18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 ECI1P42126 302 aa18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 HERV-K104P61576 105 aa18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 SP6Q3SY56 376 aa18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 FIP1L1Q6UN15 594 aaKnown RBP18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 ZNF497Q6ZNH5 498 aa18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 IL1F10Q8WWZ1 152 aa18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 MRPL24Q96A35 216 aaKnown RBP18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 KIRREL1Q96J84 757 aa18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 TREM2Q9NZC2 230 aa18.23■□□□□ 0.51
CHRNA7-228ENST00000637519 IGHV3OR15-7A0A075B7D8 119 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 TEX13DA0A0J9YY54 714 aaPredicted RBP18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 KIR2DS1A0A191URI9 304 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms