RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 H0YIZ8 118 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 H7C1C5 153 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 M0R2Z0 102 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 HCRTR1O43613 425 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 EDIL3O43854 480 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 RAMP1O60894 148 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 GAGE7O76087 117 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 HPRT1P00492 218 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 MOSP00540 346 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 IGKV5-2P06315 115 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 HOXB7P09629 217 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 GAGE12FP0CL80 117 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 GAGE12GP0CL81 117 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 GAGE12IP0CL82 117 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 TRAPPC2P0DI81 140 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 TRAPPC2BP0DI82 140 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 CXCL2P19875 107 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 BCL3P20749 454 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 MIPP30301 263 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 BRS3P32247 399 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 PTGDSP41222 190 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 APOC4P55056 127 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 LIM2P55344 173 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 SEC61BP60468 96 aaKnown RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 NCS1P62166 190 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 LCN6P62502 163 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 SLC35A1P78382 337 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 CAV1Q03135 178 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ZNF85Q03923 595 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 MEF2CQ06413 473 aaPredicted RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 ZNF155Q12901 538 aaPredicted RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 GAGE4Q13068 117 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ZNF154Q13106 437 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 PMAIP1Q13794 54 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 LY6DQ14210 128 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 GPR18Q14330 331 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 P2RY6Q15077 328 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 RBMS2Q15434 407 aaKnown RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 SIX1Q15475 284 aaPredicted RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 DUSP5Q16690 384 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ZFP69Q49AA0 526 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 MS4A13Q5J8X5 152 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 PYY3Q5JQD4 70 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 NHLRC3Q5JS37 347 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 CLLU1Q5K131 121 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 PAPPA-AS1Q5QFB9 102 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 FAM120AOSQ5T036 256 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ZNF626Q68DY1 528 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OR2T5Q6IEZ7 315 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ZNF549Q6P9A3 640 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 GDPGP1Q6ZNW5 385 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 Q6ZSR6 202 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 Q6ZVQ6 151 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 FAM183BPQ6ZVS7 135 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 AMIGO2Q86SJ2 522 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OR8I2Q8N0Y5 310 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 TCEANCQ8N8B7 351 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OR4M1Q8NGD0 313 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OR13C8Q8NGS7 320 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OR10R2Q8NGX6 335 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OR2T29Q8NH02 315 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OR10D3Q8NH80 312 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 NT5CQ8TCD5 201 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ZFAND1Q8TCF1 268 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 SECTM1Q8WVN6 248 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 ACY3Q96HD9 319 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 SEC22AQ96IW7 307 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 IP6K3Q96PC2 410 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OR52B2Q96RD2 323 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 MACROD1Q9BQ69 325 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 OVOL2Q9BRP0 275 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 SLC25A33Q9BSK2 321 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 EMC6Q9BV81 110 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 PBDC1Q9BVG4 233 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 TM2D1Q9BX74 207 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 PITPNM3Q9BZ71 974 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 RBM38Q9H0Z9 239 aaKnown RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 OR2D2Q9H210 308 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 Q9H521 79 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 Q9HAA7 133 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 C3orf14Q9HBI5 128 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 HES4Q9HCC6 221 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 UBE2TQ9NPD8 197 aaPredicted RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 UQCC1Q9NVA1 299 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 SCN3BQ9NY72 215 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 NUDT4Q9NZJ9 180 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 RPS6KB2Q9UBS0 482 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 RPL26L1Q9UNX3 145 aaKnown RBP2.46□□□□□ -2.02
VIM-210ENST00000637053 ST3GAL6Q9Y274 331 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 HS3ST2Q9Y278 367 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 WNK3Q9BYP7 1800 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ABCA10Q8WWZ4 1543 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 CCDC141Q6ZP82 1450 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 CACNA1SQ13698 1873 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SSH2Q76I76 1423 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 A0A087WZ39 114 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 A0A0U1RQV1 116 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 A0A1B0GV50 99 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 A6NDN8 102 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms