RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-215	ENST00000636674	SELENOH	Q8IZQ5	122 aa	Known RBP	12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	FAM24B	Q8N5W8	94 aa		12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	TMEM252	Q8N6L7	170 aa		12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	SUMF2	Q8NBJ7	301 aa		12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	OR2G3	Q8NGZ4	309 aa		12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	CD300LF	Q8TDQ1	290 aa		12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	MR1	Q95460	341 aa		12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	PAPOLG	Q9BWT3	736 aa	Known RBP	12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	NCKAP5	O14513	1909 aa		12.52	□□□□□ -0.41
CLN6-215	ENST00000636674	SDK1	Q7Z5N4	2213 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674		A0A1W2PPE2	198 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	ZNF724	A8MTY0	619 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	AP4M1	O00189	453 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	HSPA12A	O43301	675 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	TUSC2	O75896	110 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	OR7C1	O76099	320 aa	Predicted RBP	12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	PATE4	P0C8F1	98 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	CEACAM1	P13688	526 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	UCP1	P25874	307 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	IGSF11	Q5DX21	431 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	ZNF695	Q8IW36	515 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	ZNF565	Q8N9K5	539 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	FGFBP3	Q8TAT2	258 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	TMEM171	Q8WVE6	324 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	PIGC	Q92535	297 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	EXTL1	Q92935	676 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	IL22RA2	Q969J5	263 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	FAM122A	Q96E09	287 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	GPR35	Q9HC97	309 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674		Q9N2K0	584 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	SLC7A10	Q9NS82	523 aa		12.51	□□□□□ -0.41
CLN6-215	ENST00000636674	RBFOX3	A6NFN3	312 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	LINC01387	J3KSC0	135 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	GDF9	O60383	454 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	ZNF806	P0C7X5	589 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	SP9	P0CG40	484 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	OR13C7	P0DN81	318 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	CBR1	P16152	277 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	POLR2G	P62487	172 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	HEPN1	Q6WQI6	88 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	SLC25A26	Q70HW3	274 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	SLC16A13	Q7RTY0	426 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	OR2V1	Q8NHB1	315 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	IFI44	Q8TCB0	444 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	P4HTM	Q9NXG6	502 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	SPEG	Q15772	3267 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674		A0A087WWC5	75 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	ZNF587B	E7ETH6	402 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	CXCL13	O43927	109 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	TK1	P04183	234 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	ARG1	P05089	322 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	FABP1	P07148	127 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	TDGF1	P13385	188 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	NBL1	P41271	181 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	ID3	Q02535	119 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	DPPA3	Q6W0C5	159 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	YRDC	Q86U90	279 aa	Known RBP	12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	ODF3L1	Q8IXM7	274 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	TCTEX1D2	Q8WW35	142 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	TMEM45B	Q96B21	275 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	MUCL1	Q96DR8	90 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	SIGLEC12	Q96PQ1	595 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	GSN-AS1	Q9NRJ2	163 aa		12.5	□□□□□ -0.41
CLN6-215	ENST00000636674	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.5	□□□□□ -0.41
CLN6-215	ENST00000636674		A0A0G2JMM0	328 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674		A0A1W2PPB8	328 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674		A0A1W2PRS3	328 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	KIR3DP1	A8MWS1	328 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	PROB1	E7EW31	1015 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	CYTIP	O60759	359 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	IFNA17	P01571	189 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674		P04436	131 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	VDAC1	P21796	283 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	NPBWR2	P48146	333 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	NOVA1	P51513	510 aa	Known RBP	12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	FGF12	P61328	243 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	OR8G1	Q15617	311 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	NAXE	Q8NCW5	288 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	OR10D3	Q8NH80	312 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	RARRES2	Q99969	163 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	OR51M1	Q9H341	326 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	GLRX2	Q9NS18	164 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	KIR2DS1	A0A191URI9	304 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	LRRC3C	A6NJW4	275 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	GPR37	O15354	613 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	YKT6	O15498	198 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	ADAM20	O43506	726 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	SSSCA1	O60232	199 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	OR2C1	O95371	312 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	HSPB1	P04792	205 aa	Known RBP	12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	SRP19	P09132	144 aa	Known RBP	12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	CTXN2	P0C2S0	81 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	EIF2S3	P41091	472 aa	Known RBP	12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	KIR2DS4	P43632	304 aa		12.49	□□□□□ -0.41
CLN6-215	ENST00000636674	VAMP2	P63027	116 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms