RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	NPIPA2	E9PIF3	369 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	MT-ATP6	P00846	226 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	HRAS	P01112	189 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	IGHE	P01854	428 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ISG15	P05161	165 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	AMY2B	P19961	511 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	TCN2	P20062	427 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ARR3	P36575	388 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	GALR1	P47211	349 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	SUMO3	P55854	103 aa	Predicted RBP	9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	CFHR1	Q03591	330 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	UNC119	Q13432	240 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	COL9A2	Q14055	689 aa	Predicted RBP	9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	CD226	Q15762	336 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ZNF74	Q16587	644 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	PRSS8	Q16651	343 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ACSF3	Q4G176	576 aa	Predicted RBP	9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	TOMM20L	Q6UXN7	152 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	C16orf82	Q7Z2V1	217 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	SLC22A24	Q8N4F4	322 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	LRTM2	Q8N967	370 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	GATS	Q8NAP1	163 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	OR4C5	Q8NGB2	326 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	TMEM37	Q8WXS4	190 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	MRPL24	Q96A35	216 aa	Known RBP	9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ANAPC16	Q96DE5	110 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ZNF845	Q96IR2	970 aa	Predicted RBP	9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ADO	Q96SZ5	270 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	NUDT22	Q9BRQ3	303 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	TMEM9B	Q9NQ34	198 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	C19orf25	Q9UFG5	118 aa	Predicted RBP	9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	HSF4	Q9ULV5	492 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	SLC7A11	Q9UPY5	501 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	ST3GAL6	Q9Y274	331 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	SLC5A6	Q9Y289	635 aa		9.36	□□□□□ -0.91
CHD2-223	ENST00000636306	TRAV36DV7	A0A075B6V5	113 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	CRYM-AS1	A6NIL9	109 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	C19orf67	A6NJJ6	358 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306		A6NJY4	79 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	AQP7	O14520	342 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	ST8SIA3	O43173	380 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	SCGB1D2	O95969	90 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	PI3	P19957	117 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	DUSP3	P51452	185 aa	Predicted RBP	9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	TPPP2	P59282	170 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	RAB11A	P62491	216 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	EWSR1	Q01844	656 aa	Known RBP eCLIP	9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	FBLN7	Q53RD9	439 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	ALG10	Q5BKT4	473 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	TPTE2P1	Q5T6R2	138 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	SLC18B1	Q6NT16	456 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	KCTD18	Q6PI47	426 aa	Predicted RBP	9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	LRRC69	Q6ZNQ3	347 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	DPY19L4	Q7Z388	723 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	ZFP62	Q8NB50	900 aa	Predicted RBP	9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	TMEM234	Q8WY98	164 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	SDSL	Q96GA7	329 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	MMP25	Q9NPA2	562 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	ZNF319	Q9P2F9	582 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	UQCR10	Q9UDW1	63 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	IGKV1D-42	A0A075B6H8	117 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306		H3BSH0	61 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306		H7BYZ3	331 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	NUDT14	O95848	222 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	NBEAP1	P0C6P0	100 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	VSIG8	P0DPA2	414 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	BCL2	P10415	239 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	ESD	P10768	282 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	HIST1H1D	P16402	221 aa	Known RBP	9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	DUSP1	P28562	367 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	LCN2	P80188	198 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	SHB	Q15464	509 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	MEP1B	Q16820	701 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	C1orf185	Q5T7R7	199 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	LCN10	Q6JVE6	187 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	TMPRSS7	Q7RTY8	843 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	FBXL14	Q8N1E6	418 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	STPG4	Q8N801	248 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	ZNF441	Q8N8Z8	693 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	OR2T10	Q8NGZ9	312 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	RNF2	Q99496	336 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	CALHM2	Q9HA72	323 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	SRA1	Q9HD15	236 aa	Known RBP	9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	COLQ	Q9Y215	455 aa	Predicted RBP	9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	WIPI2	Q9Y4P8	454 aa		9.35	□□□□□ -0.91
CHD2-223	ENST00000636306	MED19	A0JLT2	244 aa	Predicted RBP	9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	SOX1	O00570	391 aa	Predicted RBP	9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	LAMTOR5	O43504	91 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	SCRG1	O75711	98 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	CER1	O95813	267 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	GZMH	P20718	246 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	EMP2	P54851	167 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	CTXN1	P60606	82 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	GNMT	Q14749	295 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	C1orf140	Q5VVS0	124 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	CYP2G1P	Q6ZSU1	146 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	LHFPL4	Q7Z7J7	247 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	IL22RA1	Q8N6P7	574 aa		9.34	□□□□□ -0.91
CHD2-223	ENST00000636306	OR10S1	Q8NGN2	331 aa		9.34	□□□□□ -0.91

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