RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 C21orf33P30042 268 aaPredicted RBP14.39□□□□□ -0.11
PNKP-225ENST00000636214 OR3A4PP47883 348 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 BLCAPP62952 87 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 HLA-DRB5Q30154 266 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 HIST2H2BDQ6DRA6 164 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 ELP2Q6IA86 826 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 RPEQ96AT9 228 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 LIN7BQ9HAP6 207 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 ZNF286AQ9HBT8 521 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 FGF20Q9NP95 211 aaPredicted RBP14.39□□□□□ -0.11
PNKP-225ENST00000636214 TAS2R4Q9NYW5 299 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 KBTBD11-OT1A0A1B0GTJ5 212 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 GABRPO00591 440 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 HTR3BO95264 441 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 CSTBP04080 98 aaKnown RBP14.38□□□□□ -0.11
PNKP-225ENST00000636214 LIMS3P0CW19 117 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 LIMS4P0CW20 117 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 CD34P28906 385 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 KCNJ3P48549 501 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 GTF2A1P52655 376 aaPredicted RBP14.38□□□□□ -0.11
PNKP-225ENST00000636214 CDK5R1Q15078 307 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 BAIAP2L2Q6UXY1 529 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 SETD9Q8NE22 299 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 CNIH3Q8TBE1 160 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 APH1BQ8WW43 257 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 CYGBQ8WWM9 190 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 TMEM106AQ96A25 262 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 ZNF649Q9BS31 505 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 SLC25A33Q9BSK2 321 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 METTL9Q9H1A3 318 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 PPIL3Q9H2H8 161 aaKnown RBP14.38□□□□□ -0.11
PNKP-225ENST00000636214 PCDHB16Q9NRJ7 776 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 CALYQ9NYX4 217 aa14.38□□□□□ -0.11
PNKP-225ENST00000636214 EXOSC1Q9Y3B2 195 aaKnown RBP14.38□□□□□ -0.11
PNKP-225ENST00000636214 OOSP1A8MZH6 123 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 BUB1B-PAK6H3BSN5 160 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 IGLV1-47P01700 117 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 CD24P25063 80 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 SMN1Q16637 294 aaKnown RBP14.37□□□□□ -0.11
PNKP-225ENST00000636214 TMEM95Q3KNT9 176 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 TPTE2P1Q5T6R2 138 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 TTC23Q5W5X9 447 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 CENPVQ7Z7K6 275 aaPredicted RBP14.37□□□□□ -0.11
PNKP-225ENST00000636214 OR51A2Q8NGJ7 313 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 OR51T1Q8NGJ9 327 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 OR10K1Q8NGX5 313 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 OR9G1Q8NH87 305 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 TOMM40LQ969M1 308 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 CITED2Q99967 270 aaPredicted RBP14.37□□□□□ -0.11
PNKP-225ENST00000636214 WNT10AQ9GZT5 417 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 MMP28Q9H239 520 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 TMEM138Q9NPI0 162 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 PAK1IP1Q9NWT1 392 aaPredicted RBP14.37□□□□□ -0.11
PNKP-225ENST00000636214 CKLFQ9UBR5 152 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 KIF25Q9UIL4 384 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 ING4Q9UNL4 249 aa14.37□□□□□ -0.11
PNKP-225ENST00000636214 G3V4G9 280 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 M0QZK8 103 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 OR2F2O95006 317 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 GDNFP39905 211 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 ETV1P50549 477 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 C17orf58Q2M2W7 97 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 PIGYQ3MUY2 71 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 C9orf152Q5JTZ5 239 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 DDI2Q5TDH0 399 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 OR2G6Q5TZ20 316 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 OR5AU1Q8NGC0 362 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 KIRREL1Q96J84 757 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 NCOR1P1Q9H4R4 102 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 IDI2-AS1Q9NZ38 188 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 ZNF281Q9Y2X9 895 aa14.36□□□□□ -0.11
PNKP-225ENST00000636214 A0A087X0M5 115 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 TRAV24A0A0B4J272 114 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 A0A1B0GX30 115 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 WBP4O75554 376 aaKnown RBP14.35□□□□□ -0.11
PNKP-225ENST00000636214 OR7C1O76099 320 aaPredicted RBP14.35□□□□□ -0.11
PNKP-225ENST00000636214 IL1AP01583 271 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 FAM106CPP0CH98 169 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 PF4V1P10720 104 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 BDKRB2P30411 391 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 ZNF93P35789 620 aaPredicted RBP14.35□□□□□ -0.11
PNKP-225ENST00000636214 RIPK1Q13546 671 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 LTC4SQ16873 150 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 ABCA11PQ4W5N1 156 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 ZNF529Q6P280 563 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 OSR2Q8N2R0 312 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 OR13A1Q8NGR1 328 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 MRGPRDQ8TDS7 321 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 NEK7Q8TDX7 302 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 RGP1Q92546 391 aaPredicted RBP14.35□□□□□ -0.11
PNKP-225ENST00000636214 SMIM19Q96E16 107 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 RBM14Q96PK6 669 aaKnown RBP14.35□□□□□ -0.11
PNKP-225ENST00000636214 C8orf4Q9NR00 106 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 BABAM2Q9NXR7 383 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 DIMT1Q9UNQ2 313 aaKnown RBP14.35□□□□□ -0.11
PNKP-225ENST00000636214 ST3GAL6Q9Y274 331 aa14.35□□□□□ -0.11
PNKP-225ENST00000636214 PRKDCP78527 4128 aaKnown RBP14.34□□□□□ -0.11
PNKP-225ENST00000636214 A0A1W2PRX2 142 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 ZNF780AO75290 641 aaPredicted RBP14.34□□□□□ -0.11
PNKP-225ENST00000636214 CDRT1O95170 752 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms