RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TMEM25Q86YD3 366 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 ZBTB34Q8NCN2 500 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 NFAM1Q8NET5 270 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 LHFPL5Q8TAF8 219 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TM4SF19Q96DZ7 209 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TSPAN32Q96QS1 320 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 PAAF1Q9BRP4 392 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 SARGQ9BW04 601 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 LTB4R2Q9NPC1 389 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 RASL12Q9NYN1 266 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 NTNG1Q9Y2I2 539 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 HIVEP3Q5T1R4 2406 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 PGPA6NDG6 321 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 FAM157AC9JC47 383 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 MT-CO3P00414 261 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 GPX1P07203 203 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 COX7A1P24310 79 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 SLC6A1P30531 599 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 FOXK2Q01167 660 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 SCD5Q86SK9 330 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 SLC25A46Q96AG3 418 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 EGLN2Q96KS0 407 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 PRNDQ9UKY0 176 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 A4GNTQ9UNA3 340 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 R4GMQ9 66 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 ZNF142P52746 1687 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 PTPN13Q12923 2485 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CSO75390 466 aaKnown RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 RBMY1FQ15415 496 aaKnown RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 PRICKLE4Q2TBC4 344 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TCF23Q7RTU1 214 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 C16orf82Q7Z2V1 217 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 ZNF683Q8IZ20 524 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 FAM24BQ8N5W8 94 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 ZNF480Q8WV37 535 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 WFIKKN1Q96NZ8 548 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 GPR82Q96P67 336 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 MAP1LC3AQ9H492 121 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CST9LQ9H4G1 147 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 PLEKHB1Q9UF11 243 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 MROH1Q8NDA8 1641 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TTC28Q96AY4 2481 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TMEM272A0A1B0GTI8 110 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 C7orf72A4D263 438 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 GJB5O95377 273 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 SEC11BP0C7V7 166 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 FUT3P21217 361 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CD96P40200 585 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CLDN20P56880 219 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 NAAAQ02083 359 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 AGERQ15109 404 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 FAM209AQ5JX71 171 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TCF24Q7RTU0 167 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 WNT5BQ9H1J7 359 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 AKIP1Q9NQ31 210 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TAS2R4Q9NYW5 299 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TUBD1Q9UJT1 453 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-212ENST00000636194 GPANK1O95872 356 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 MBPP02686 304 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-212ENST00000636194 CD70P32970 193 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 SELENOTP62341 195 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 IL11RAQ14626 422 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 TXNRD3NBQ6F5E7 133 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 LAX1Q8IWV1 398 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 ZNRF1Q8ND25 227 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 YIPF6Q96EC8 236 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 TARM1B6A8C7 271 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 CST5P28325 142 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-212ENST00000636194 DUTP33316 252 aaKnown RBP5.37□□□□□ -1.55
SCN1A-212ENST00000636194 CLDN12P56749 244 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 CKS1BP61024 79 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 BATF2Q8N1L9 274 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 FAM89BQ8N5H3 189 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 ARRDC1Q8N5I2 433 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 TMEM86BQ8N661 226 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 MED20Q9H944 212 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 DOCK1Q14185 1865 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 ZNF646O15015 1829 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-212ENST00000636194 FAM221AA4D161 298 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 NAPSAO96009 420 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 CFDP00746 253 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-212ENST00000636194 LHBP01229 141 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 ARG1P05089 322 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 SFTA3P0C7M3 94 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 CCL14Q16627 93 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 CXorf66Q5JRM2 361 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-212ENST00000636194 TMEM88Q6PEY1 159 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 DPPA3Q6W0C5 159 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 HTR3DQ70Z44 454 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 GTSCR1Q86UQ5 136 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 C12orf76Q8N812 135 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-212ENST00000636194 OR6X1Q8NH79 312 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 MRGPRX1Q96LB2 322 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 GUCD1Q96NT3 240 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 PCYT2Q99447 389 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 ABHD14AQ9BUJ0 271 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 MAGT1Q9H0U3 335 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 FOCADQ5VW36 1801 aa5.37□□□□□ -1.55
SCN1A-212ENST00000636194 A0A087X0M5 115 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms