RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 RSRP1Q9BUV0 290 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 IFT22Q9H7X7 185 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 OR14J1Q9UGF5 321 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 FBXO24O75426 580 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 DBPQ10586 325 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 PHLDA2Q53GA4 152 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 R4GN57 208 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 A0A1W2PPH5 198 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 NGFP01138 241 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 F2RP25116 425 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 FOXL2P58012 376 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 KRTAP27-1Q3LI81 207 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 BEX5Q5H9J7 111 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 OR2T2Q6IF00 324 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 Q6ZRG5 221 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 FN3KRPQ9HA64 309 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 DEPPQ9NTK1 212 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 SCN3AQ9NY46 2000 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 DOCK7Q96N67 2140 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 OR5AC1P0C628 307 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 UCP2P55851 309 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 IL1F10Q8WWZ1 152 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 NPAS1Q99742 590 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 OR6C3Q9NZP0 311 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF319Q9P2F9 582 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 MMP24Q9Y5R2 645 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM218A2RU14 115 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ST8SIA5O15466 376 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 CEACAM1P13688 526 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF16P17020 682 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ATP5IP56385 69 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 PHYHD1Q5SRE7 291 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 RDH5Q92781 318 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 RCC2Q9P258 522 aaKnown RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF524Q96C55 264 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 WDYHV1Q96HA8 205 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM56Q96MV1 263 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 HSD17B10Q99714 261 aaKnown RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 SEBOXQ9HB31 216 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM56-RWDD3S4R434 201 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 LRRK1Q38SD2 2015 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 A8MXK9 166 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 NPIPB11E5RHQ5 1161 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 ADAP1O75689 374 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 PI3P19957 117 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 UCP1P25874 307 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM187Q14656 261 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 SUMF2Q8NBJ7 301 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 ADAD2Q8NCV1 583 aaKnown RBP3.92□□□□□ -1.78
SCN1A-210ENST00000635776 DEFB124Q8NES8 71 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 SLC39A7Q92504 469 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 SFXN3Q9BWM7 321 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 ABCA7Q8IZY2 2146 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 H2AFB1P0C5Y9 115 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 ACKR3P25106 362 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 GABRA2P47869 451 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM33P57088 247 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 MDP1Q86V88 176 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 NANPQ8TBE9 248 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 CXorf58Q96LI9 332 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 IQCF6A8MYZ5 107 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 FGF16O43320 207 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 CA6P23280 308 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 Q0VFX4 171 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF66Q6ZN08 573 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 CISD2Q8N5K1 135 aaKnown RBP3.92□□□□□ -1.78
SCN1A-210ENST00000635776 WDR31Q8NA23 367 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 RTBDNQ9BSG5 229 aaPredicted RBP3.92□□□□□ -1.78
SCN1A-210ENST00000635776 HRH4Q9H3N8 390 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 IL19Q9UHD0 177 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 F10P00742 488 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 WNT2P09544 360 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 DEFB109BQ30KR1 87 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 GLYATL2Q8WU03 294 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 MAFIPQ8WZ33 124 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 WBP1Q96G27 269 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 SIGLEC12Q96PQ1 595 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 SMOC1Q9H4F8 434 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.92□□□□□ -1.78
SCN1A-210ENST00000635776 FBXL17Q9UF56 701 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF230Q9UIE0 474 aaPredicted RBP3.92□□□□□ -1.78
SCN1A-210ENST00000635776 ASCC3Q8N3C0 2202 aaKnown RBP3.92□□□□□ -1.78
SCN1A-210ENST00000635776 MPTX1A8MV57 137 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 PATE4P0C8F1 98 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 IL3RAP26951 378 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 SULT1A1P50225 295 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 SOHLH1Q5JUK2 328 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 OR2G3Q8NGZ4 309 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 OR51H1Q8NH63 302 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 PRDM6Q9NQX0 595 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 BIN3Q9NQY0 253 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 IL17BQ9UHF5 180 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 A0A1W2PP11 408 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 C1orf196B1AJZ1 125 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 PITX3O75364 302 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 BCL3P20749 454 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 RAB11AP62491 216 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 C3orf36Q3SXR2 165 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 HIPK2Q9H2X6 1198 aa3.92□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF552Q9H707 407 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms