RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 IGHV1-69P01742 117 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 UBBP0CG47 229 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 MGMTP16455 207 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 CCL3L1P16619 93 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 HTR2CP28335 458 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 FGF9P31371 208 aaPredicted RBP7.97□□□□□ -1.13
LINC00339-210ENST00000635675 GLIPR1P48060 266 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 DLX1P56177 255 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 PRB3Q04118 309 aaPredicted RBP7.97□□□□□ -1.13
LINC00339-210ENST00000635675 AESQ08117 197 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 TAF9Q16594 264 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 PAN3Q58A45 887 aaKnown RBP7.97□□□□□ -1.13
LINC00339-210ENST00000635675 BRD3OSQ6XYD6 125 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 LINC00596Q86U02 117 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 BPIFB2Q8N4F0 458 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 TPRX1Q8N7U7 411 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 SLC25A28Q96A46 364 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 COQ2Q96H96 371 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 MS4A7Q9GZW8 240 aaPredicted RBP7.97□□□□□ -1.13
LINC00339-210ENST00000635675 BANF2Q9H503 90 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 AK6Q9Y3D8 172 aaKnown RBP7.97□□□□□ -1.13
LINC00339-210ENST00000635675 LINC00312Q9Y6C7 94 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 CUBNO60494 3623 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 KIAA2026Q5HYC2 2103 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 MEX3AA1L020 520 aaKnown RBP7.96□□□□□ -1.13
LINC00339-210ENST00000635675 FUOMA2VDF0 154 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 SLC17A2O00624 439 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 TCF21O43680 179 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 CRTAPO75718 401 aaPredicted RBP7.96□□□□□ -1.13
LINC00339-210ENST00000635675 OR7C1O76099 320 aaPredicted RBP7.96□□□□□ -1.13
LINC00339-210ENST00000635675 ZNF728P0DKX0 622 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 VSIG8P0DPA2 414 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 PSMD7P51665 324 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 ERVFRD-1P60508 538 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 QRFPP83859 136 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 PAX5Q02548 391 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 MPV17LQ2QL34 196 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 RUSC1-AS1Q66K80 236 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 NCR3LG1Q68D85 454 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 HCP5Q6MZN7 132 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 PDZD9Q8IXQ8 264 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 SUMF2Q8NBJ7 301 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 OR6M1Q8NGM8 313 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 ZNF418Q8TF45 676 aaPredicted RBP7.96□□□□□ -1.13
LINC00339-210ENST00000635675 CORO2AQ92828 525 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 Q96M66 194 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 ZNF48Q96MX3 618 aaPredicted RBP7.96□□□□□ -1.13
LINC00339-210ENST00000635675 DPCDQ9BVM2 203 aaPredicted RBP7.96□□□□□ -1.13
LINC00339-210ENST00000635675 SUCNR1Q9BXA5 334 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 CST11Q9H112 138 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 PRDM13Q9H4Q3 707 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 NCOR1P1Q9H4R4 102 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 PTTG2Q9NZH5 202 aa7.96□□□□□ -1.13
LINC00339-210ENST00000635675 UBE2J1Q9Y385 318 aaPredicted RBP7.96□□□□□ -1.13
LINC00339-210ENST00000635675 hCG_1809904A0A1W2PP81 198 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 A0A1W2PPE2 198 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 A0A1W2PR64 198 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 A0A1W2PRV1 198 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 ODAMA1E959 279 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A10PA6NDY2 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A18PA6NE21 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A16PA6NEW6 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A20PA6NIJ5 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A8PA6NJQ4 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A7PA6NKC0 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A22PA8MWA6 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A12PA8MX19 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A5PA8MXJ8 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A23PA8MXZ1 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 ZNF701M0R085 212 aaPredicted RBP7.95□□□□□ -1.14
LINC00339-210ENST00000635675 HSPB6O14558 160 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 VENTXO95231 258 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 BPNT1O95861 308 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 RBP4P02753 201 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A15PP0C7V4 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A13PP0C7W8 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A14PP0C7W9 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM90A24PP0C7X0 464 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 CGB3P0DN86 165 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 CGB7P0DN87 165 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 MYL9P24844 172 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 SDC2P34741 201 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 KCNJ3P48549 501 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 UBE2E1P51965 193 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 HILS1P60008 231 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 SRSF2Q01130 221 aaKnown RBP7.95□□□□□ -1.14
LINC00339-210ENST00000635675 GUCA2AQ02747 115 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 KLRD1Q13241 179 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 ATXN7L3Q14CW9 347 aaPredicted RBP7.95□□□□□ -1.14
LINC00339-210ENST00000635675 KRBOX4Q5JUW0 171 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 OR10K2Q6IF99 312 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 SIGLECL1Q8N7X8 197 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 KCNG3Q8TAE7 436 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 PLPPR1Q8TBJ4 325 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 FAM46BQ96A09 425 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 KCTD7Q96MP8 289 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 ZNF714Q96N38 554 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 TSC22D3Q99576 134 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 BCL7BQ9BQE9 202 aa7.95□□□□□ -1.14
LINC00339-210ENST00000635675 BARHL1Q9BZE3 327 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms