RNA–Protein interactions for RNA: ENST00000635206.1

CCDC149-208, Transcript of coiled-coil domain containing 149, human

APPRIS ALT2 TSL 5 BASIC

Gene CCDC149, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC149-208	ENST00000635206	TRAV39	A0A0B4J263	110 aa		11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	SFT2D2	O95562	160 aa		11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	DUS4L	O95620	317 aa	Known RBP	11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	RPS2	P15880	293 aa	Known RBP	11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	PPP3CB	P16298	524 aa		11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	KLF3	P57682	345 aa	Predicted RBP	11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	PAN3	Q58A45	887 aa	Known RBP	11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	SLC38A6	Q8IZM9	456 aa		11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	OR5M8	Q8NGP6	311 aa		11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	MRPL37	Q9BZE1	423 aa	Known RBP	11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	HES4	Q9HCC6	221 aa		11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	DECR2	Q9NUI1	292 aa		11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	C1orf123	Q9NWV4	160 aa		11.38	□□□□□ -0.59
CCDC149-208	ENST00000635206	hCG_1807616	A0A1W2PRN6	198 aa		11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	AADAC	P22760	399 aa		11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	HERPUD1	Q15011	391 aa		11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	ZNF146	Q15072	292 aa		11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	SURF2	Q15527	256 aa	Predicted RBP	11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206		Q6ZS49	121 aa		11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	ASCC1	Q8N9N2	400 aa	Known RBP	11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	PLPPR1	Q8TBJ4	325 aa		11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	SEC22A	Q96IW7	307 aa		11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	C14orf166	Q9Y224	244 aa	Known RBP	11.37	□□□□□ -0.59
CCDC149-208	ENST00000635206	DPRX	A6NFQ7	191 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	NOS1AP	O75052	506 aa	Predicted RBP	11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	TSC22D2	O75157	780 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	SLC34A2	O95436	690 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	ACAA1	P09110	424 aa	Predicted RBP	11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	ZNF728	P0DKX0	622 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	SSTR2	P30874	369 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	LY6D	Q14210	128 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	RBM39	Q14498	530 aa	Known RBP	11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	ANKRD55	Q3KP44	614 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	PRORY	Q9H606	182 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	TAAR3P	Q9P1P4	343 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	ITPR1	Q14643	2758 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	IGKV1-6	A0A0C4DH72	117 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	TRDC	B7Z8K6	153 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	SH2D1B	O14796	132 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	RGS13	O14921	159 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	BET1	O15155	118 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	SPRY3	O43610	288 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	HAND1	O96004	215 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	CTSD	P07339	412 aa	Predicted RBP	11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	RCC1	P18754	421 aa	Predicted RBP	11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	CA7	P43166	264 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	SEC61A1	P61619	476 aa	Known RBP	11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	SNTB1	Q13884	538 aa	Known RBP	11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	ARL6IP6	Q8N6S5	226 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	ELMOD3	Q96FG2	381 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	WFIKKN1	Q96NZ8	548 aa		11.36	□□□□□ -0.59
CCDC149-208	ENST00000635206	IGLV3-9	A0A075B6K5	115 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	DBX1	A6NMT0	343 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	GLA	P06280	429 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	CTRB1	P17538	263 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	ECI1	P42126	302 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	GLP1R	P43220	463 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	SORD	Q00796	357 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	SPIN3	Q5JUX0	258 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	CTRB2	Q6GPI1	263 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	ACP7	Q6ZNF0	438 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	OR5T2	Q8NGG2	359 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	LRRC29	Q8WV35	223 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	MOB3A	Q96BX8	217 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	TRBV6-6	A0A0A6YYG2	114 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	PLSCR5	A0PG75	271 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	ABCD4	O14678	606 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	PSPN	O60542	156 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	PTBP3	O95758	552 aa	Known RBP	11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	EGR1	P18146	543 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	CD200	P41217	278 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	BSPH1	Q075Z2	132 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	ZNF880	Q6PDB4	577 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	TMEM108	Q6UXF1	575 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	ST6GALNAC3	Q8NDV1	305 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	OR2V2	Q96R30	315 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	PDCD10	Q9BUL8	212 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	RIMS4	Q9H426	269 aa	Predicted RBP	11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	SLA2	Q9H6Q3	261 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	ATP23	Q9Y6H3	246 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	PCNX1	Q96RV3	2341 aa		11.35	□□□□□ -0.59
CCDC149-208	ENST00000635206	TRAV14DV4	A0A0A6YYC5	116 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	CRYZL1	O95825	349 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	PPY	P01298	95 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	HLA-G	P17693	338 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	CXCL2	P19875	107 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	PTAFR	P25105	342 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	CASP6	P55212	293 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	PIGP	P57054	158 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	RPS23	P62266	143 aa	Known RBP	11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	PHLDA2	Q53GA4	152 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	USB1	Q9BQ65	265 aa	Known RBP	11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	METRN	Q9UJH8	293 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	SPTA1	P02549	2419 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	FXYD6-FXYD2	A0A087WZ82	144 aa		11.34	□□□□□ -0.59
CCDC149-208	ENST00000635206	C13orf42	A0A1B0GVH6	325 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms