RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 UTS2BQ765I0 119 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 OR8H3Q8N146 312 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 HAVCR2Q8TDQ0 301 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 LEAP2Q969E1 77 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 SPSB1Q96BD6 273 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 FGGYQ96C11 551 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 IL4I1Q96RQ9 567 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 PPIL3Q9H2H8 161 aaKnown RBP12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 NEK6Q9HC98 313 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 KRT84Q9NSB2 600 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 LINC01548A6NM66 108 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 DEGS1O15121 323 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 KDM4BO94953 1096 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 CALB2P22676 271 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 GLP1RP43220 463 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 CDX1P47902 265 aaPredicted RBP12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 DAPP51397 102 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 EFNB1P98172 346 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 TMEM244Q5VVB8 128 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 Q6P435 159 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 FAHD1Q6P587 224 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 FAM220AQ7Z4H9 259 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 OR10H4Q8NGA5 316 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 OR5D18Q8NGL1 313 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 NRBF2Q96F24 287 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 RHOFQ9HBH0 211 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 CALYQ9NYX4 217 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 WARS2Q9UGM6 360 aaKnown RBP12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 SCOCQ9UIL1 159 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 PSG11Q9UQ72 335 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 SIRT4Q9Y6E7 314 aaPredicted RBP12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 SMAD5-AS1Q9Y6J3 95 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 SACSQ9NZJ4 4579 aa12.28□□□□□ -0.44
PDLIM3-213ENST00000629667 TENM2Q9NT68 2774 aa12.27□□□□□ -0.44
PDLIM3-213ENST00000629667 NCBP2LA6PVI3 153 aaKnown RBP12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 HSPB6O14558 160 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 FKBP6O75344 327 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 APOL3O95236 402 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 LY86O95711 162 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 C21orf33P30042 268 aaPredicted RBP12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 ATP6V1E1P36543 226 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 KIR3DL2P43630 455 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 GNG10P50151 68 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 GPR50Q13585 617 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 LTC4SQ16873 150 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 ZNF260Q3ZCT1 412 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 SPATA24Q86W54 205 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 OR10X1Q8NGY0 326 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 SPACA5Q96QH8 159 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 THTPAQ9BU02 230 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 IDI2-AS1Q9NZ38 188 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 GNG8Q9UK08 70 aa12.27□□□□□ -0.45
PDLIM3-213ENST00000629667 MEIKINA0A087WXM9 373 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 ZAR1LA6NP61 321 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 CGB3P0DN86 165 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 CGB7P0DN87 165 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 GPR12P47775 334 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 FOXE3Q13461 319 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 DOC2BQ14184 412 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 C12orf73Q69YU5 71 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 TGIF2LXQ8IUE1 241 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 SAXO1Q8IYX7 474 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 OR51T1Q8NGJ9 327 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 OR13A1Q8NGR1 328 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 RCHY1Q96PM5 261 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 ABCG5Q9H222 651 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 PALMDQ9NP74 551 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 LIN7CQ9NUP9 197 aaKnown RBP12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 KIF25Q9UIL4 384 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 EPPK1P58107 5090 aaKnown RBP12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 DNAH7Q8WXX0 4024 aa12.26□□□□□ -0.45
PDLIM3-213ENST00000629667 H0YJX3 145 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 RRP9O43818 475 aaKnown RBP12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 MPZL2O60487 215 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 MITFO75030 526 aaPredicted RBP12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 IL1AP01583 271 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 ELANEP08246 267 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 EPHA2P29317 976 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 HTR1FP30939 366 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 GNGT1P63211 74 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 EBI3Q14213 229 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 CDK5R1Q15078 307 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 TP53I3Q53FA7 332 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 MOB3BQ86TA1 216 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 RFESDQ8TAC1 157 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 EAF1Q96JC9 268 aaPredicted RBP12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 OSBPL10Q9BXB5 764 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 BARHL1Q9BZE3 327 aa12.25□□□□□ -0.45
PDLIM3-213ENST00000629667 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 CCRL2O00421 344 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 HSD17B6O14756 317 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 GAPDHP04406 335 aaKnown RBP12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 ISG15P05161 165 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 TMEM225BP0DP42 221 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 LYL1P12980 280 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 ZNF816Q0VGE8 651 aaPredicted RBP12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 FLOT2Q14254 428 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 PAN3Q58A45 887 aaKnown RBP12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 SLC16A12Q6ZSM3 486 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms