RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 SH2D1BO14796 132 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TAAR5O14804 337 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 MBTPS2O43462 519 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 SYNGR1O43759 233 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OR7C2O60412 319 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 RDH16O75452 317 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 STK16O75716 305 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 KLF8O95600 359 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 IFNA7P01567 189 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 HBE1P02100 147 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 APOA2P02652 100 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 DBIP07108 87 aaKnown RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 DNAH10OSP0CZ25 163 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 HSD17B1P14061 328 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF250P15622 560 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 USF1P22415 310 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 RPA3P35244 121 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 KIR2DS4P43632 304 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF133P52736 654 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF121P58317 390 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TAS2R30P59541 319 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 BTG1P62324 171 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 RPS4XP62701 263 aaKnown RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 RPL8P62917 257 aaKnown RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 HIST1H3AP68431 136 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 H3F3AP84243 136 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 CDK5Q00535 292 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 PSG4Q00888 419 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF763Q0D2J5 394 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 EIF2B1Q14232 305 aaKnown RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 SLC10A1Q14973 349 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 RHEBQ15382 184 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 SHHQ15465 462 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 GUSBP1Q15486 140 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 CCL14Q16627 93 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 GUCA2BQ16661 112 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 MICAQ29983 383 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TRMT12Q53H54 448 aaKnown RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 CLLU1Q5K131 121 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 COL5A1-AS1Q5SY13 56 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 C1orf195Q5TG92 126 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 C1orf189Q5VU69 101 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ZFAND6Q6FIF0 208 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 NANOGP8Q6NSW7 305 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 AGTRAPQ6RW13 159 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TBPL2Q6SJ96 375 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OPN5Q6U736 354 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TMEM64Q6YI46 380 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TMEM184AQ6ZMB5 413 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 HIST2H3AQ71DI3 136 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ASRGL1Q7L266 308 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 FAM19A1Q7Z5A9 133 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 HSD17B13Q7Z5P4 300 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 C17orf64Q86WR6 236 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 FBXO16Q8IX29 292 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 CA13Q8N1Q1 262 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 BPIFB2Q8N4F0 458 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 C11orf42Q8N5U0 333 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 FAM24BQ8N5W8 94 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 EID2Q8N6I1 236 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TPRX1Q8N7U7 411 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 MDS2Q8NDY4 140 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 DUSP18Q8NEJ0 188 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OR8G5Q8NG78 346 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OR4C13Q8NGP0 309 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OR9I1Q8NGQ6 314 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OR1L8Q8NGR8 309 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OR10R2Q8NGX6 335 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OR5K2Q8NHB8 316 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 CYGBQ8WWM9 190 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 RDH5Q92781 318 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 DIRAS2Q96HU8 199 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 SLC35G5Q96KT7 338 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 SNHG12Q9BXW3 62 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 LINC00470Q9BZP3 86 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 MS4A6AQ9H2W1 248 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 OR51J1Q9H342 316 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 RNF167Q9H6Y7 350 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF665Q9H7R5 613 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ZDHHC11Q9H8X9 412 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 UBE2TQ9NPD8 197 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 ACOT13Q9NPJ3 140 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 LHX9Q9NQ69 397 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 CISHQ9NSE2 258 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 MED9Q9NWA0 146 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 SIGLEC8Q9NYZ4 499 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 LSM7Q9UK45 103 aaKnown RBP2.31□□□□□ -2.04
CNOT1-223ENST00000628857 RAB22AQ9UL26 194 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TRAPPC2LQ9UL33 140 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 U3KQ87 197 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 PTPRJQ12913 1337 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 IGSF9BQ9UPX0 1349 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TNS3Q68CZ2 1445 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 FANCAO15360 1455 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 KDM5DQ9BY66 1539 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 LRRIQ1Q96JM4 1722 aa2.31□□□□□ -2.04
CNOT1-223ENST00000628857 TRAV30A0A087WSZ9 112 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 A0A0G2JN53 185 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 SMIM28A0A1B0GU29 152 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 A0A1W2PRE2 83 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms