RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CHST6Q9GZX3 395 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 C12orf4Q9NQ89 552 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 UFSP2Q9NUQ7 469 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 ALG5Q9Y673 324 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 RAI1Q7Z5J4 1906 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 DYSFO75923 2080 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 TRAV24A0A0B4J272 114 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 A0A1W2PPR1 153 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 C7orf66A4D0T2 115 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 WNT9BO14905 357 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 ARPC1BO15143 372 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 SPRY3O43610 288 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 PEX14O75381 377 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 PMP2P02689 132 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 CD3EP07766 207 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 FCGR3AP08637 254 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 OR4A8P0C604 315 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF44P15621 663 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 PAX1P15863 534 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 TNFSF4P23510 183 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 LOXP28300 417 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 OR3A3P47888 321 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 MECP2P51608 486 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 GMFBP60983 142 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 SCGB2B2Q4G0G5 96 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 BEX5Q5H9J7 111 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 Q6P435 159 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 IDO2Q6ZQW0 420 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 OR13C8Q8NGS7 320 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 OR5H2Q8NGV7 314 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 NEK7Q8TDX7 302 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 NEUROG1Q92886 237 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 PIK3IP1Q96FE7 263 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 OR2V2Q96R30 315 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 SLC25A21Q9BQT8 299 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 WDR13Q9H1Z4 485 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 GHITMQ9H3K2 345 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 IFT22Q9H7X7 185 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 FN3KRPQ9HA64 309 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 SLC2A8Q9NY64 477 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF221Q9UK13 617 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 ZDHHC8Q9ULC8 765 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 TANC2Q9HCD6 1990 aa7.99□□□□□ -1.13
PDLIM5-223ENST00000627587 A0A0A6YYJ9 748 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 DEFB108AA8MXU0 73 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 HSPB6O14558 160 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 DEGS1O15121 323 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 GLAP06280 429 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 GLRA1P23415 457 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 RBM39Q14498 530 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF146Q15072 292 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 CHRFAM7AQ494W8 412 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 SPIN3Q5JUX0 258 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 VAX1Q5SQQ9 334 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 PRIMA1Q86XR5 153 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 ARRDC1Q8N5I2 433 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 SUMF2Q8NBJ7 301 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 OR5AP2Q8NGF4 316 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 GIMAP1Q8WWP7 306 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 MEGF10Q96KG7 1140 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 UBTD1Q9HAC8 227 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 CHMP1AQ9HD42 196 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 C1orf123Q9NWV4 160 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 GLS2Q9UI32 602 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 OR2AT4A6NND4 320 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 HS3ST1O14792 307 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 SH2D1BO14796 132 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 PRAF2O60831 178 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 NAPSAO96009 420 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 PLAUP00749 431 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 ARPC4P59998 168 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 TSPAN5P62079 268 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 TNFAIP6P98066 277 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 SMIM21Q3B7S5 101 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF554Q86TJ5 538 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 AKAP14Q86UN6 197 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 TMEM17Q86X19 198 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 OR10Z1Q8NGY1 313 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 LILRB1Q8NHL6 650 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 DSCAML1Q8TD84 2053 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 LRRC29Q8WV35 223 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 ITLN1Q8WWA0 313 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 RDH5Q92781 318 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 DACT3Q96B18 629 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 DIRC2Q96SL1 478 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 DPCDQ9BVM2 203 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 IL19Q9UHD0 177 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 ANXA10Q9UJ72 324 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 RNF115Q9Y4L5 304 aa7.98□□□□□ -1.13
PDLIM5-223ENST00000627587 E7EQL1 145 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 BOLA2-SMG1P6H3BVE0 249 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 M0R233 179 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 SMAD7O15105 426 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 OR2H2O95918 312 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 IGHV1-46P01743 117 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 HPXP02790 462 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 RLN1P04808 185 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 HNRNPCP07910 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms