RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 MEP1BQ16820 701 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 LILRA6Q6PI73 481 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 Q6ZVL8 140 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CRIPAKQ8N1N5 446 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 DCAF4L2Q8NA75 395 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CTHRC1Q96CG8 243 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 GPR146Q96CH1 333 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 PERPQ96FX8 193 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 SLC46A2Q9BY10 475 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 ZNF586Q9NXT0 402 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 CISD1Q9NZ45 108 aaKnown RBP6.91□□□□□ -1.3
VPS11-209ENST00000622309 REV3LO60673 3130 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 A0A0B4J2E0 115 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 A0A1B0GX12 115 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 FAM166BA8MTA8 275 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 DIRC3C9JPN6 131 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 HYPMO75409 117 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 FHL1Q13642 323 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 C1orf100Q5SVJ3 147 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 SAMD13Q5VXD3 122 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 SLAMF6Q96DU3 332 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 SLC46A1Q96NT5 459 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 OR6C1Q96RD1 312 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 RASL10BQ96S79 203 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
VPS11-209ENST00000622309 VN1R1Q9GZP7 353 aa6.91□□□□□ -1.3
VPS11-209ENST00000622309 PRUNE2Q8WUY3 3088 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 A0A1B0GV72 72 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 METTL12A8MUP2 240 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 CORTO00230 105 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 CCL16O15467 120 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 GALR2O43603 387 aaPredicted RBP6.9□□□□□ -1.3
VPS11-209ENST00000622309 SNAI2O43623 268 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 HPNP05981 417 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 B4GALT1P15291 398 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 ARL3P36405 182 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 ARR3P36575 388 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 TMEM240Q5SV17 173 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 LGI3Q8N145 548 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 OR52L2PQ8NGH6 319 aa6.9□□□□□ -1.3
VPS11-209ENST00000622309 OR5B21A6NL26 309 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 ERI3O43414 337 aaKnown RBP6.9□□□□□ -1.31
VPS11-209ENST00000622309 CDS2O95674 445 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 SEMA4FO95754 770 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 MT-ATP6P00846 226 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 CTSDP07339 412 aaPredicted RBP6.9□□□□□ -1.31
VPS11-209ENST00000622309 IGLC2P0DOY2 106 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 IGLC3P0DOY3 106 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 FSTP19883 344 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 MSR1P21757 451 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 MPLP40238 635 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 TAS2R46P59540 309 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 SNRPD1P62314 119 aaKnown RBP6.9□□□□□ -1.31
VPS11-209ENST00000622309 EXOSC7Q15024 291 aaKnown RBP6.9□□□□□ -1.31
VPS11-209ENST00000622309 SHBQ15464 509 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 MSMO1Q15800 293 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 ITPRIPL2Q3MIP1 535 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 ZNF787Q6DD87 383 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 FBXL14Q8N1E6 418 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 TCTEX1D1Q8N7M0 179 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 OR2M7Q8NG81 312 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 RNF125Q96EQ8 232 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 PELI2Q9HAT8 420 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 HHLA2Q9UM44 414 aa6.9□□□□□ -1.31
VPS11-209ENST00000622309 FAM24AA6NFZ4 105 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 H7C1C5 153 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 M0QXV9 152 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 SPRY1O43609 319 aaPredicted RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 GNG7O60262 68 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 GDF9O60383 454 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 IFNA1P01562 189 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 CEACAM5P06731 702 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 GLB1P16278 677 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 BIDP55957 195 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 LCN6P62502 163 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 NSDHLQ15738 373 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 ZNF793Q6ZN11 406 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 H1FNTQ75WM6 255 aaPredicted RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 CALHM1Q8IU99 346 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 SAXO1Q8IYX7 474 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 OR5AR1Q8NGP9 310 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 P2RX4Q99571 388 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 RAB11FIP5Q9BXF6 653 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 LSM7Q9UK45 103 aaKnown RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 CCL26Q9Y258 94 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 MDC1Q14676 2089 aaKnown RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 OR7C2O60412 319 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 DBHP09172 617 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 IGFBP3P17936 291 aaPredicted RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 DUSP1P28562 367 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 SRP14P37108 136 aaKnown RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 MRPS34P82930 218 aaKnown RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 UNC119Q13432 240 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 RTP5Q14D33 572 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 ZNF74Q16587 644 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 DCST2Q5T1A1 773 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 PTCRAQ6ISU1 281 aaPredicted RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 SLC48A1Q6P1K1 146 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 LCN15Q6UWW0 184 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 LHFPL1Q86WI0 220 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms