RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	RAB4B	P61018	213 aa		12.47	□□□□□ -0.41
SYNRG-231	ENST00000622045	OR1P1	Q8NH06	330 aa		12.47	□□□□□ -0.41
SYNRG-231	ENST00000622045	NOL4L	Q96MY1	436 aa	Predicted RBP	12.47	□□□□□ -0.41
SYNRG-231	ENST00000622045	SMDT1	Q9H4I9	107 aa		12.47	□□□□□ -0.41
SYNRG-231	ENST00000622045	COL4A2	P08572	1712 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	HERV-K104	P61576	105 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	CLN3	Q13286	438 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	ADIRF	Q15847	76 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	SPIN3	Q5JUX0	258 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	ZNF66	Q6ZN08	573 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	THNSL2	Q86YJ6	484 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	TMEM252	Q8N6L7	170 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	MSI2	Q96DH6	328 aa	Known RBP	12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	C18orf12	Q96KH6	178 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	DEFB126	Q9BYW3	111 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	LRP4	O75096	1905 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	IGHV1OR15-9	A0A0B4J2B8	117 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	NPIPA2	E9PIF3	369 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	NPIPA3	F8WFD2	350 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	DVL1	O14640	695 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	ZFAND5	O76080	213 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	PLA2G5	P39877	138 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	PMS2P11	Q13670	270 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	RAB24	Q969Q5	203 aa		12.46	□□□□□ -0.41
SYNRG-231	ENST00000622045	PROB1	E7EW31	1015 aa		12.46	□□□□□ -0.42
SYNRG-231	ENST00000622045	SFTPC	P11686	197 aa		12.46	□□□□□ -0.42
SYNRG-231	ENST00000622045	MRPS34	P82930	218 aa	Known RBP	12.46	□□□□□ -0.42
SYNRG-231	ENST00000622045	SPTSSA	Q969W0	71 aa		12.46	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF501	Q96CX3	271 aa	Predicted RBP	12.46	□□□□□ -0.42
SYNRG-231	ENST00000622045	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.46	□□□□□ -0.42
SYNRG-231	ENST00000622045	DFFB	O76075	338 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	H3F3A	P84243	136 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	OR10A7	Q8NGE5	316 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	BORCS8	Q96FH0	119 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	TM2D1	Q9BX74	207 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	SCGB1D1	O95968	90 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	IDH3G	P51553	393 aa	Predicted RBP	12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	PRSS8	Q16651	343 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	MYOT	Q9UBF9	498 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	LCAT	P04180	440 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	RPL29	P47914	159 aa	Known RBP	12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	CRIP3	Q6Q6R5	217 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	SNIP1	Q8TAD8	396 aa	Known RBP	12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	DKKL1	Q9UK85	242 aa		12.45	□□□□□ -0.42
SYNRG-231	ENST00000622045	CEBPZOS	A8MTT3	80 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	IGLV3-19	P01714	112 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	TLE4	Q04727	773 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	DNLZ	Q5SXM8	178 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	FAM90A2P	Q658T7	463 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	NCR3LG1	Q68D85	454 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045		Q96M66	194 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045		A0A1B0GU03	582 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	ADAM20	O43506	726 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	PAX5	Q02548	391 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	FAM185A	Q8N0U4	392 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	OR5T1	Q8NG75	326 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF442	Q9H7R0	627 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	PLEKHF2	Q9H8W4	249 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	CPAMD8	Q8IZJ3	1885 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	LOC102723971	A0A1B0GUV8	181 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045		A0A1W2PR77	199 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	RRP8	O43159	456 aa	Known RBP	12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	TMEM50A	O95807	157 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	CYB5R3	P00387	301 aa	Predicted RBP	12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	PAX1	P15863	534 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	RAET1L	Q5VY80	246 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	TEX38	Q6PEX7	206 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	C17orf82	Q86X59	251 aa	Predicted RBP	12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF695	Q8IW36	515 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	OR4D5	Q8NGN0	318 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	SSC4D	Q8WTU2	575 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	NAT6	Q93015	286 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	ULBP2	Q9BZM5	246 aa		12.44	□□□□□ -0.42
SYNRG-231	ENST00000622045	EYS	Q5T1H1	3165 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045		A0A0U1RQV5	110 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	PITX3	O75364	302 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	AADAC	P22760	399 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	PCP4	P48539	62 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	BATF	Q16520	125 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	SLC16A14	Q7RTX9	510 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	NFAM1	Q8NET5	270 aa	Predicted RBP	12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF385A	Q96PM9	386 aa	Known RBP	12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	OR6C1	Q96RD1	312 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	RSG1	Q9BU20	258 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	AQP7P3	A6NL99	342 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	SNAI3	Q3KNW1	292 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	OR2M3	Q8NG83	312 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	VSIR	Q9H7M9	311 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF286A	Q9HBT8	521 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	PRUNE2	Q8WUY3	3088 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045		A0A1W2PPQ1	181 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045		G3V3Y1	287 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	DHH	O43323	396 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	PIAS2	O75928	621 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	REL	Q04864	619 aa	Predicted RBP	12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	SHB	Q15464	509 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	PIGY	Q3MUY2	71 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms