RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SAMD13Q5VXD3 122 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 Q6ZS52 159 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 RNF165Q6ZSG1 346 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 SLC25A26Q70HW3 274 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 TCF23Q7RTU1 214 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 YRDCQ86U90 279 aaKnown RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 OR5R1Q8NH85 324 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 RDH5Q92781 318 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 SFRP2Q96HF1 295 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 METTL1Q9UBP6 276 aaKnown RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 KCNK7Q9Y2U2 307 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 NMUP48645 174 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 KLRB1Q12918 225 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 RIPPLY2Q5TAB7 128 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 PAQR6Q6TCH4 344 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 RNF167Q9H6Y7 350 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 CLN8Q9UBY8 286 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 KLF13Q9Y2Y9 288 aaPredicted RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 FAM221AA4D161 298 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 EREGO14944 169 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 SRSF10O75494 262 aaKnown RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 CTAG2O75638 210 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 SLC35B1P78383 322 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 HFEQ30201 348 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 SAPCD1Q5SSQ6 148 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 ZNF385CQ66K41 422 aaPredicted RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 CA13Q8N1Q1 262 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 PRRC2BQ5JSZ5 2229 aaKnown RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 TAPBPO15533 448 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 SYNGR2O43760 224 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 SLC25A42Q86VD7 318 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 MRPL30Q8TCC3 161 aaKnown RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 MZB1Q8WU39 189 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 RND1Q92730 232 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 FBXO17Q96EF6 278 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 SLC25A22Q9H936 323 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 HSPB1P04792 205 aaKnown RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 CD1BP29016 333 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 ZNF121P58317 390 aaPredicted RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 RELQ04864 619 aaPredicted RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 BCDIN3DQ7Z5W3 292 aaKnown RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 TGIF2LXQ8IUE1 241 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 NKAIN4Q8IVV8 208 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 LINC00518Q8N0U6 118 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 NFAM1Q8NET5 270 aaPredicted RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 NOXO1Q8NFA2 376 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 ST6GAL2Q96JF0 529 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 GABRG3Q99928 467 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 ALX4Q9H161 411 aaPredicted RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 JKAMPQ9P055 326 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 DHRS3O75911 302 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 CDX1P47902 265 aaPredicted RBP6.37□□□□□ -1.39
COLCA1-205ENST00000620864 SLC37A1P57057 533 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 WDR31Q8NA23 367 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 OR13H1Q8NG92 308 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 INSM2Q96T92 566 aaPredicted RBP6.37□□□□□ -1.39
COLCA1-205ENST00000620864 CRISPLD2Q9H0B8 497 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 SPAARA0A1B0GVQ0 90 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 C5orf49A4QMS7 147 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 PPP6CO00743 305 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 PPP1CCP36873 323 aaKnown RBP6.37□□□□□ -1.39
COLCA1-205ENST00000620864 DYNLT3P51808 116 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 FAAP20Q6NZ36 180 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 RTN4RL1Q86UN2 441 aaPredicted RBP6.37□□□□□ -1.39
COLCA1-205ENST00000620864 BHLHE23Q8NDY6 225 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 MRAP2Q96G30 205 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 FSCN3Q9NQT6 498 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 ONECUT1Q9UBC0 465 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 STRCP1A6NGW2 1772 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 FRG2CA6NGY1 282 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 C9orf172C9J069 976 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 CYR61O00622 381 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 B4GALT3O60512 393 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 ADAP1O75689 374 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 EPHA8P29322 1005 aaPredicted RBP6.37□□□□□ -1.39
COLCA1-205ENST00000620864 C19orf54Q5BKX5 351 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 MARCH3Q86UD3 253 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 NIT1Q86X76 327 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 BCORP1Q8N888 145 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 SYT8Q8NBV8 401 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 SLC16A11Q8NCK7 471 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 RNF133Q8WVZ7 376 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 PRNDQ9UKY0 176 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 IGKV6D-21A0A0A0MT36 114 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 KLK8O60259 260 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 PDCD6O75340 191 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 PI3P19957 117 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 CD40P25942 277 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 LPAR6P43657 344 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 KLF3P57682 345 aaPredicted RBP6.37□□□□□ -1.39
COLCA1-205ENST00000620864 ARF6P62330 175 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 DUSP2Q05923 314 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 KCNAB1Q14722 419 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 MAMSTRQ6ZN01 415 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 RBM45Q8IUH3 476 aaKnown RBP6.37□□□□□ -1.39
COLCA1-205ENST00000620864 A4GNTQ9UNA3 340 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 TMEM272A0A1B0GTI8 110 aa6.37□□□□□ -1.39
COLCA1-205ENST00000620864 NDUFB3O43676 98 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms