RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 VEGFCP49767 419 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 PAX2Q02962 417 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 FOXL1Q12952 345 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 MOGAT2Q3SYC2 334 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 RNASE12Q5GAN4 147 aaKnown RBP13.35□□□□□ -0.27
CD40-207ENST00000620709 WDR25Q64LD2 544 aaPredicted RBP13.35□□□□□ -0.27
CD40-207ENST00000620709 ZNF57Q68EA5 555 aaPredicted RBP13.35□□□□□ -0.27
CD40-207ENST00000620709 SLC25A26Q70HW3 274 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 CENPSQ8N2Z9 138 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 OR56B1Q8NGI3 324 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 OR10R2Q8NGX6 335 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 FCAMRQ8WWV6 532 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 TM2D1Q9BX74 207 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 TNFRSF19Q9NS68 423 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 C1orf123Q9NWV4 160 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 IGKV1-12A0A0C4DH73 117 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 MDFIC2A0A1B0GVS7 189 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 A0A1B0GWJ7 208 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 hCG_1807616A0A1W2PRN6 198 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 CYB5AP00167 134 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 IGKV1D-12P01611 117 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 CD3GP09693 182 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 HKR1P10072 659 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 GTF2F2P13984 249 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 FGF12P61328 243 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 OXA1LQ15070 435 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 BRD3OSQ6XYD6 125 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 MKXQ8IYA7 352 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 OR51T1Q8NGJ9 327 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 OR52I2Q8NH67 350 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 Q8TCH9 128 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 TAF15Q92804 592 aaKnown RBP eCLIP13.34□□□□□ -0.27
CD40-207ENST00000620709 ZDHHC16Q969W1 377 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 NICN1Q9BSH3 213 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 PCGF1Q9BSM1 259 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 PKIBQ9C010 78 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 SELENOIQ9C0D9 397 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 KIR2DS1A0A191URI9 304 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 LINC00854A0A1B0GVQ3 168 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 TMEM210A6NLX4 147 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 SULT1C2O00338 296 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 ADAM20O43506 726 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 LANCL1O43813 399 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 PTHLHP12272 177 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 PRSS3P35030 304 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 GDNFP39905 211 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 KCNJ8Q15842 424 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 ZNF826PQ6ZT77 177 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 TOMM5Q8N4H5 51 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 FAM89BQ8N5H3 189 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 CHST4Q8NCG5 386 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 SGMS2Q8NHU3 365 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 UPRTQ96BW1 309 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 MRPS24Q96EL2 167 aaKnown RBP13.34□□□□□ -0.27
CD40-207ENST00000620709 Q96M66 194 aa13.34□□□□□ -0.27
CD40-207ENST00000620709 ZMAT3Q9HA38 289 aaKnown RBP13.34□□□□□ -0.27
CD40-207ENST00000620709 A0A0A6YYD4 124 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 J3QT63 122 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 LGALS8O00214 317 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 EGR1P18146 543 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 SLC9A3R2Q15599 337 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 ZNF260Q3ZCT1 412 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 HAGHLQ6PII5 290 aaPredicted RBP13.33□□□□□ -0.28
CD40-207ENST00000620709 SPERTQ8NA61 448 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 AQP3Q92482 292 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 OR51I2Q9H344 312 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 SCPEP1Q9HB40 452 aa13.33□□□□□ -0.28
CD40-207ENST00000620709 RBMX2Q9Y388 322 aaKnown RBP13.33□□□□□ -0.28
CD40-207ENST00000620709 IGHV3OR15-7A0A075B7D8 119 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 C22orf46C9J442 243 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 PLA2G10O15496 165 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 ENSAO43768 121 aaKnown RBP13.32□□□□□ -0.28
CD40-207ENST00000620709 FSTL3O95633 263 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 ECDO95905 644 aaPredicted RBP13.32□□□□□ -0.28
CD40-207ENST00000620709 GYPAP02724 150 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 LPLP06858 475 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 GSTT2BP0CG30 244 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 PPIAL4GP0DN37 164 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 MPZP25189 248 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 AP3S2P59780 193 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 SSBP1Q04837 148 aaKnown RBP13.32□□□□□ -0.28
CD40-207ENST00000620709 MZT1Q08AG7 82 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 IL24Q13007 206 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 ARL6IP1Q15041 203 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 FAM76BQ5HYJ3 339 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 GPR157Q5UAW9 335 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 ZNF841Q6ZN19 808 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 Q6ZTK2 550 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 RAB3CQ96E17 227 aa13.32□□□□□ -0.28
CD40-207ENST00000620709 C11orf54Q9H0W9 315 aaPredicted RBP13.32□□□□□ -0.28
CD40-207ENST00000620709 TRAV38-1A0A0B4J264 116 aa13.31□□□□□ -0.28
CD40-207ENST00000620709 MEIOCA2RUB1 952 aa13.31□□□□□ -0.28
CD40-207ENST00000620709 TMEM235A6NFC5 223 aa13.31□□□□□ -0.28
CD40-207ENST00000620709 OOEPA6NGQ2 149 aa13.31□□□□□ -0.28
CD40-207ENST00000620709 SOCS1O15524 211 aa13.31□□□□□ -0.28
CD40-207ENST00000620709 LYRM1O43325 122 aa13.31□□□□□ -0.28
CD40-207ENST00000620709 HOXA3O43365 443 aaPredicted RBP13.31□□□□□ -0.28
CD40-207ENST00000620709 AKR7A2O43488 359 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms