RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 MALLQ13021 153 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 C3orf36Q3SXR2 165 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 CHRFAM7AQ494W8 412 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 TMEM230Q96A57 120 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 CYYR1Q96J86 154 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 POM121L2Q96KW2 1035 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 ZNF503-AS2A6NEH8 195 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 VAMP1P23763 118 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 CALCRP30988 508 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 NAAAQ02083 359 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 PLP2Q04941 152 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 NHLRC3Q5JS37 347 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 TGIF2LYQ8IUE0 185 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 SAXO1Q8IYX7 474 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 MUC15Q8N387 334 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 RTBDNQ9BSG5 229 aaPredicted RBP18.27■□□□□ 0.52
SGMS1-210ENST00000619438 GSX2Q9BZM3 304 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 EHFQ9NZC4 300 aa18.27■□□□□ 0.52
SGMS1-210ENST00000619438 ZNF230Q9UIE0 474 aaPredicted RBP18.27■□□□□ 0.52
SGMS1-210ENST00000619438 C5orf49A4QMS7 147 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 RP2O75695 350 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 B3GALNT1O75752 331 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 SFT2D2O95562 160 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 IGLV1-44P01699 117 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 CELA3BP08861 270 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 NPY4RP50391 375 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 ATP5J2P56134 94 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 PRSS12P56730 875 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 TAF9Q16594 264 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 ESCO2Q56NI9 601 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 WFDC11Q8NEX6 87 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 MFFQ9GZY8 342 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 DECR2Q9NUI1 292 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 COMMD9Q9P000 198 aa18.26■□□□□ 0.51
SGMS1-210ENST00000619438 FLNAP21333 2647 aaKnown RBP18.26■□□□□ 0.51
SGMS1-210ENST00000619438 A0A0D9SG52 128 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 PQLC2LA1A4F0 135 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A10PA6NDY2 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A18PA6NE21 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A16PA6NEW6 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A20PA6NIJ5 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A8PA6NJQ4 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A7PA6NKC0 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A22PA8MWA6 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A12PA8MX19 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A5PA8MXJ8 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A23PA8MXZ1 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 LEUTXA8MZ59 168 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A15PP0C7V4 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A13PP0C7W8 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A14PP0C7W9 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 FAM90A24PP0C7X0 464 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 APOBEC3AP31941 199 aaPredicted RBP18.25■□□□□ 0.51
SGMS1-210ENST00000619438 CDKN1AP38936 164 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 RAB14P61106 215 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 ZNF345Q14585 488 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 NKAPLQ5M9Q1 402 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 Q5PR19 223 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 RFPL4BQ6ZWI9 263 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 IGFBPL1Q8WX77 278 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 PDCD10Q9BUL8 212 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 ARL6Q9H0F7 186 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 ZNF850A8MQ14 1090 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 ARID1AO14497 2285 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 CD99P14209 185 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 C11orf87Q6NUJ2 197 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 VHLLQ6RSH7 139 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 MRPL21Q7Z2W9 205 aaKnown RBP18.25■□□□□ 0.51
SGMS1-210ENST00000619438 ZNF546Q86UE3 836 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 OR56B2PQ8NGI1 322 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 OR51F2Q8NH61 342 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 CBLN4Q9NTU7 201 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 ZNF701Q9NV72 531 aaPredicted RBP18.25■□□□□ 0.51
SGMS1-210ENST00000619438 AK3Q9UIJ7 227 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 KIF25Q9UIL4 384 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 ANXA10Q9UJ72 324 aa18.25■□□□□ 0.51
SGMS1-210ENST00000619438 VSTM5A8MXK1 200 aa18.24■□□□□ 0.51
SGMS1-210ENST00000619438 RBM11P57052 281 aaKnown RBP18.24■□□□□ 0.51
SGMS1-210ENST00000619438 DTX2Q86UW9 622 aa18.24■□□□□ 0.51
SGMS1-210ENST00000619438 OR10AD1Q8NGE0 317 aa18.24■□□□□ 0.51
SGMS1-210ENST00000619438 CASTOR1Q8WTX7 329 aa18.24■□□□□ 0.51
SGMS1-210ENST00000619438 CMSS1Q9BQ75 279 aaKnown RBP18.24■□□□□ 0.51
SGMS1-210ENST00000619438 FAAP24Q9BTP7 215 aa18.24■□□□□ 0.51
SGMS1-210ENST00000619438 RAB18Q9NP72 206 aa18.24■□□□□ 0.51
SGMS1-210ENST00000619438 TNFSF18Q9UNG2 199 aa18.24■□□□□ 0.51
SGMS1-210ENST00000619438 OVOL3O00110 214 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 SDCBPO00560 298 aaPredicted RBP18.23■□□□□ 0.51
SGMS1-210ENST00000619438 TPD52L2O43399 206 aaKnown RBP18.23■□□□□ 0.51
SGMS1-210ENST00000619438 PDCD6O75340 191 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 OR2F2O95006 317 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 PLATP00750 562 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 SFTPBP07988 381 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 SUPT4H1P63272 117 aaKnown RBP18.23■□□□□ 0.51
SGMS1-210ENST00000619438 CYCSP99999 105 aaKnown RBP18.23■□□□□ 0.51
SGMS1-210ENST00000619438 PRDX4Q13162 271 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 OR2F1Q13607 317 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 CEACAM21Q3KPI0 293 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 ELP2Q6IA86 826 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 GSG1LQ6UXU4 331 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 SLC51BQ86UW2 128 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms