RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 GIMAP1Q8WWP7 306 aa14.18□□□□□ -0.14
TRAPPC3-210ENST00000617904 ZNF488Q96MN9 340 aa14.18□□□□□ -0.14
TRAPPC3-210ENST00000617904 DPCDQ9BVM2 203 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-210ENST00000617904 ALX4Q9H161 411 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-210ENST00000617904 SEBOXQ9HB31 216 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-210ENST00000617904 ZSCAN5BA6NJL1 495 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 SNRPGP15A8MWD9 76 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 HS3ST1O14792 307 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 HAND1O96004 215 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 CD55P08174 381 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 CBX3Q13185 183 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 SURF2Q15527 256 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 MICBQ29980 383 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 ACP7Q6ZNF0 438 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 Q6ZS49 121 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 GLCCI1Q86VQ1 547 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 BATF2Q8N1L9 274 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 TERB2Q8NHR7 220 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 LINC01560Q8TB33 94 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 HES4Q9HCC6 221 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 RNF7Q9UBF6 113 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 SPG11Q96JI7 2443 aa14.17□□□□□ -0.14
TRAPPC3-210ENST00000617904 C7orf66A4D0T2 115 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 C17orf100A8MU93 164 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 MECP2P51608 486 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 UBE2MP61081 183 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 RRAS2P62070 204 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 SNRPD2P62316 118 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 EFNB3Q15768 340 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 C4orf46Q504U0 113 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 CD276Q5ZPR3 534 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 C22orf34Q6ZV56 151 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 PEG10Q86TG7 708 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 OR4D10Q8NGI6 311 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 ZFAND1Q8TCF1 268 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 ITLN1Q8WWA0 313 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 SLC6A7Q99884 636 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 DHRS9Q9BPW9 319 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 OR51J1Q9H342 316 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 RAB9BQ9NP90 201 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 MYOZ1Q9NP98 299 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 KCNIP1Q9NZI2 227 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 OR14J1Q9UGF5 321 aa14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 C14orf166Q9Y224 244 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-210ENST00000617904 TRBV6-6A0A0A6YYG2 114 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 SRRM5B3KS81 715 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 DIRAS3O95661 229 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 OR2H2O95918 312 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 IGHV1-46P01743 117 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 DUSP1P28562 367 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 LPCAT3Q6P1A2 487 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 FAHD2BQ6P2I3 314 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 GLDNQ6ZMI3 551 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 MOGAT3Q86VF5 341 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 NRGNQ92686 78 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 RDH5Q92781 318 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 FAHD2AQ96GK7 314 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 CISD1Q9NZ45 108 aaKnown RBP14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 ZNF221Q9UK13 617 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 ZFHX3Q15911 3703 aa14.15□□□□□ -0.14
TRAPPC3-210ENST00000617904 A0A0A6YYJ9 748 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 SHISA9B4DS77 424 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 F8VVB4 439 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 F8VWA3 439 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 SIRPB1O00241 398 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 GOSR1O95249 250 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 TK1P04183 234 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 ZNF735P0CB33 412 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 OR5H8P0DN80 308 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 S100GP29377 79 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 GMFBP60983 142 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 HERV-K104P61576 105 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 MPPED2Q15777 294 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 TRAT1Q6PIZ9 186 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 OVCH2Q7RTZ1 564 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 TMED4Q7Z7H5 227 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 C11orf53Q8IXP5 236 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 FAM222BQ8WU58 562 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 PIK3IP1Q96FE7 263 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 ZNF230Q9UIE0 474 aaPredicted RBP14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 TRAPPC2LQ9UL33 140 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 PPP1R3CQ9UQK1 317 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 WIPI2Q9Y4P8 454 aa14.15□□□□□ -0.15
TRAPPC3-210ENST00000617904 RTTNQ86VV8 2226 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 TMEM30CPA0ZSE6 113 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 TRDCB7Z8K6 153 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 HSPB6O14558 160 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 PGAM2P15259 253 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 FPR2P25090 351 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 LMO1P25800 156 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 PDCD1Q15116 288 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 CARTPTQ16568 116 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 MSMPQ1L6U9 139 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 Q6P435 159 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 BRICD5Q6PL45 260 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 ZNF826PQ6ZT77 177 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 OR5D13Q8NGL4 314 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 LILRB1Q8NHL6 650 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 Q8TCH9 128 aa14.14□□□□□ -0.15
TRAPPC3-210ENST00000617904 NEURL2Q9BR09 285 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms