RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 KIRREL1Q96J84 757 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 SUCNR1Q9BXA5 334 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 FAM234AQ9H0X4 552 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 RGCCQ9H4X1 137 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 DUSP13Q9UII6 198 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 SH3BGRL2Q9UJC5 107 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 EDARQ9UNE0 448 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 GPR37O15354 613 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 ATG12O94817 140 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 SOX8P57073 446 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 ZNF273Q14593 569 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 ZNF766Q5HY98 468 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 MDP1Q86V88 176 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 RNF138Q8WVD3 245 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 FER1L6-AS2Q96M78 137 aa12.49□□□□□ -0.41
PRKD1-209ENST00000616995 PUS1Q9Y606 427 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRKD1-209ENST00000616995 CPAMD8Q8IZJ3 1885 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 C3orf85A0A1B0GTC6 90 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 MUC1P15941 1255 aaPredicted RBP12.48□□□□□ -0.41
PRKD1-209ENST00000616995 CXorf66Q5JRM2 361 aaPredicted RBP12.48□□□□□ -0.41
PRKD1-209ENST00000616995 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 SLC30A7Q8NEW0 376 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 RFESDQ8TAC1 157 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 OR2J1Q9GZK6 312 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 SP1P08047 785 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 ACP1P24666 158 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 CTSSP25774 331 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 OTX1P32242 354 aaPredicted RBP12.48□□□□□ -0.41
PRKD1-209ENST00000616995 ASB13Q8WXK3 278 aa12.48□□□□□ -0.41
PRKD1-209ENST00000616995 SFTA3P0C7M3 94 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 NPBWR1P48145 328 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 LHX2P50458 406 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 LHFPL1Q86WI0 220 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 TM2D1Q9BX74 207 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 TMEM9BQ9NQ34 198 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 MTCH1Q9NZJ7 389 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 FBLN5Q9UBX5 448 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 LPAR3Q9UBY5 353 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 KLF13Q9Y2Y9 288 aaPredicted RBP12.47□□□□□ -0.41
PRKD1-209ENST00000616995 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 CRYM-AS1A6NIL9 109 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 CBR1P16152 277 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 HAGHQ16775 308 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 OR10J5Q8NHC4 309 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 DNTTIP1Q9H147 329 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 RNASEK-C17orf49H0YIS7 233 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 EDDM3AQ14507 147 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 LIAT1Q6ZQX7 453 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 ZNF826PQ6ZT77 177 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 ISOC2Q96AB3 205 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 UQCC1Q9NVA1 299 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 TINAGQ9UJW2 476 aa12.47□□□□□ -0.41
PRKD1-209ENST00000616995 MED12LQ86YW9 2145 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 A0A1W2PNU3 283 aaPredicted RBP12.46□□□□□ -0.41
PRKD1-209ENST00000616995 E5RGE8 158 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 MPPED1O15442 326 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 JTBO76095 146 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 GFRA1P56159 465 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 PJVKQ0ZLH3 352 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 OR1J1Q8NGS3 322 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 OR2G3Q8NGZ4 309 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 GLYATL2Q8WU03 294 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 SPACA1Q9HBV2 294 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 FAM212BQ9NTI7 297 aaPredicted RBP12.46□□□□□ -0.41
PRKD1-209ENST00000616995 NSG2Q9Y328 171 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 AUP1Q9Y679 476 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 ABCA1O95477 2261 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 CLDN18P56856 261 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 TRIP6Q15654 476 aaKnown RBP12.46□□□□□ -0.41
PRKD1-209ENST00000616995 CRIP3Q6Q6R5 217 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 PHYHIPLQ96FC7 376 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 GLS2Q9UI32 602 aa12.46□□□□□ -0.41
PRKD1-209ENST00000616995 DBX1A6NMT0 343 aa12.46□□□□□ -0.42
PRKD1-209ENST00000616995 DEFB108AA8MXU0 73 aa12.46□□□□□ -0.42
PRKD1-209ENST00000616995 TERTO14746 1132 aaKnown RBP12.46□□□□□ -0.42
PRKD1-209ENST00000616995 RUNX1Q01196 453 aa12.46□□□□□ -0.42
PRKD1-209ENST00000616995 DEFB109BQ30KR1 87 aa12.46□□□□□ -0.42
PRKD1-209ENST00000616995 SHEQ5VZ18 495 aa12.46□□□□□ -0.42
PRKD1-209ENST00000616995 ZPBPQ9BS86 351 aa12.46□□□□□ -0.42
PRKD1-209ENST00000616995 CYTL1Q9NRR1 136 aa12.46□□□□□ -0.42
PRKD1-209ENST00000616995 SPTBN1Q01082 2364 aaKnown RBP12.46□□□□□ -0.42
PRKD1-209ENST00000616995 INTS1Q8N201 2190 aaKnown RBP12.45□□□□□ -0.42
PRKD1-209ENST00000616995 IGKV1D-13A0A0B4J2D9 117 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 CST4P01036 141 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 GLAP06280 429 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 IGKV1-13P0DP09 117 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 FAM58AQ8N1B3 248 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 SUMF2Q8NBJ7 301 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 OR10Z1Q8NGY1 313 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 LHFPL5Q8TAF8 219 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 S100A6P06703 90 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 TMEM267Q0VDI3 215 aaPredicted RBP12.45□□□□□ -0.42
PRKD1-209ENST00000616995 MRPL49Q13405 166 aaKnown RBP12.45□□□□□ -0.42
PRKD1-209ENST00000616995 ABLIM2Q6H8Q1 611 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 ZNF818PQ6ZRF7 136 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 LDLRAD3Q86YD5 345 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 MSL2Q9HCI7 577 aa12.45□□□□□ -0.42
PRKD1-209ENST00000616995 SH2D2AQ9NP31 389 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms