RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 GABRA6Q16445 453 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 C18orf21Q32NC0 220 aaPredicted RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 ANKRD55Q3KP44 614 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 ACTL10Q5JWF8 245 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 CARD17Q5XLA6 110 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 HAVCR1Q96D42 359 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 PSMG3Q9BT73 122 aaPredicted RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 LRTM1Q9HBL6 345 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 POPDC3Q9HBV1 291 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 J3QR06 171 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 TRAF3IP2O43734 574 aaPredicted RBP13.35□□□□□ -0.27
NOP56-220ENST00000616692 CSTBP04080 98 aaKnown RBP13.35□□□□□ -0.27
NOP56-220ENST00000616692 RPS4Y1P22090 263 aaKnown RBP13.35□□□□□ -0.27
NOP56-220ENST00000616692 CLDN15P56746 228 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 SNRPNP63162 240 aaKnown RBP13.35□□□□□ -0.27
NOP56-220ENST00000616692 PSG9Q00887 426 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 PTSQ03393 145 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 RAET1LQ5VY80 246 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 C1orf174Q8IYL3 243 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 NMNAT2Q9BZQ4 307 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
NOP56-220ENST00000616692 AK6Q9Y3D8 172 aaKnown RBP13.35□□□□□ -0.27
NOP56-220ENST00000616692 FFAR2O15552 330 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 ARG2P78540 354 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 SRSF6Q13247 344 aaKnown RBP13.35□□□□□ -0.27
NOP56-220ENST00000616692 PTX4Q96A99 478 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 SIGLEC12Q96PQ1 595 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 LAMP3Q9UQV4 416 aa13.35□□□□□ -0.27
NOP56-220ENST00000616692 LMO7DNF2Z398 122 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 TNFRSF13BO14836 293 aaPredicted RBP13.34□□□□□ -0.27
NOP56-220ENST00000616692 KLK10O43240 276 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 JTBO76095 146 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 S1PR2O95136 353 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 SERPINA7P05543 415 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 CX3CR1P49238 355 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 ATP5IP56385 69 aaPredicted RBP13.34□□□□□ -0.27
NOP56-220ENST00000616692 PITX1P78337 314 aaPredicted RBP13.34□□□□□ -0.27
NOP56-220ENST00000616692 HSD52Q0P140 79 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 TRMT12Q53H54 448 aaKnown RBP13.34□□□□□ -0.27
NOP56-220ENST00000616692 CST9LP1Q5W188 147 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 TP53INP2Q8IXH6 220 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 KLHDC1Q8N7A1 406 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 STRAPQ9Y3F4 350 aaKnown RBP13.34□□□□□ -0.27
NOP56-220ENST00000616692 RBFOX3A6NFN3 312 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 WIPF1O43516 503 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 WISP1O95388 367 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 FURINP09958 794 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 CDKN2AP42771 156 aaKnown RBP13.34□□□□□ -0.27
NOP56-220ENST00000616692 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
NOP56-220ENST00000616692 OR5A2Q8NGI9 324 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 OR6T1Q8NGN1 323 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 OR6N2Q8NGY6 317 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 OR2AE1Q8NHA4 323 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 OR10C1Q96KK4 312 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 TSPAN32Q96QS1 320 aa13.34□□□□□ -0.27
NOP56-220ENST00000616692 IGSF23A1L1A6 192 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 NTN3O00634 580 aaPredicted RBP13.33□□□□□ -0.28
NOP56-220ENST00000616692 EIF1AYO14602 144 aaKnown RBP13.33□□□□□ -0.28
NOP56-220ENST00000616692 KLF4O43474 513 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 ARL6IP5O75915 188 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 EIF1AXP47813 144 aaKnown RBP13.33□□□□□ -0.28
NOP56-220ENST00000616692 ARF3P61204 181 aaPredicted RBP13.33□□□□□ -0.28
NOP56-220ENST00000616692 TIAL1Q01085 375 aaKnown RBP eCLIP13.33□□□□□ -0.288e-9■■■□□ 15
NOP56-220ENST00000616692 SLC25A52Q3SY17 297 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 FCRL6Q6DN72 434 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 LRRC70Q7Z2Q7 622 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 ATP23Q9Y6H3 246 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 C13orf42A0A1B0GVH6 325 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 IL2RAP01589 272 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 CD3DP04234 171 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 IFNW1P05000 195 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 CD99P14209 185 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 TCN2P20062 427 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 ELAVL4P26378 380 aaKnown RBP13.33□□□□□ -0.28
NOP56-220ENST00000616692 TPPP2P59282 170 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 PLCXD2Q0VAA5 305 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 ZNF788Q6ZQV5 615 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 TMEM217Q8N7C4 229 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 PRR7Q8TB68 274 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 GALMQ96C23 342 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 TSSK3Q96PN8 268 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 STRADBQ9C0K7 418 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 ZNF391Q9UJN7 358 aa13.33□□□□□ -0.28
NOP56-220ENST00000616692 MRPS28Q9Y2Q9 187 aaKnown RBP13.33□□□□□ -0.28
NOP56-220ENST00000616692 ARID1BQ8NFD5 2236 aaPredicted RBP13.33□□□□□ -0.28
NOP56-220ENST00000616692 CCDC88CQ9P219 2028 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 MAP1LC3B2A6NCE7 125 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 PPP1CCP36873 323 aaKnown RBP13.32□□□□□ -0.28
NOP56-220ENST00000616692 RPS15P62841 145 aaKnown RBP13.32□□□□□ -0.28
NOP56-220ENST00000616692 PNRC1Q12796 327 aaPredicted RBP13.32□□□□□ -0.28
NOP56-220ENST00000616692 CPSF6Q16630 551 aaKnown RBP eCLIP13.32□□□□□ -0.28
NOP56-220ENST00000616692 HIST3H3Q16695 136 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 PWWP2BQ6NUJ5 590 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 GTF2H5Q6ZYL4 71 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 COMMD6Q7Z4G1 85 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 TMEM256Q8N2U0 113 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 PPP1R35Q8TAP8 253 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 BLNKQ8WV28 456 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 MAP1LC3BQ9GZQ8 125 aa13.32□□□□□ -0.28
NOP56-220ENST00000616692 CORO2BQ9UQ03 480 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms