RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 RBFOX1Q9NWB1 397 aaKnown RBP15.31■□□□□ 0.04
CDX1-202ENST00000616154 TBL2Q9Y4P3 447 aaKnown RBP15.31■□□□□ 0.04
CDX1-202ENST00000616154 DNAH3Q8TD57 4116 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 TRBV5-7A0A0A0MS05 114 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 TRDV1A0A1B0GX56 115 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 HAND1O96004 215 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 CYB5AP00167 134 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 FGF9P31371 208 aaPredicted RBP15.3■□□□□ 0.04
CDX1-202ENST00000616154 POU3F4P49335 361 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 ZP1P60852 638 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 FABP5Q01469 135 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 MEF2CQ06413 473 aaPredicted RBP15.3■□□□□ 0.04
CDX1-202ENST00000616154 Q499Y3 187 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 GPR141Q7Z602 305 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 SERPINA12Q8IW75 414 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 DYNAPQ8N1N2 210 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 Q8N2B8 174 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 ASCC1Q8N9N2 400 aaKnown RBP15.3■□□□□ 0.04
CDX1-202ENST00000616154 OR5D14Q8NGL3 314 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 OR13C5Q8NGS8 318 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 THRSPQ92748 146 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 FOXRED1Q96CU9 486 aaPredicted RBP15.3■□□□□ 0.04
CDX1-202ENST00000616154 NKX3-1Q99801 234 aaPredicted RBP15.3■□□□□ 0.04
CDX1-202ENST00000616154 NEK6Q9HC98 313 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 IL36RNQ9UBH0 155 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 TCF19Q9Y242 345 aa15.3■□□□□ 0.04
CDX1-202ENST00000616154 ODF3BA8MYP8 253 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 SULT1B1O43704 296 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 BCL3P20749 454 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 SLC16A12Q6ZSM3 486 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 TCF23Q7RTU1 214 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 RNF144BQ7Z419 303 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 SATL1Q86VE3 508 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 ANKRD13BQ86YJ7 626 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 PHYHIPQ92561 330 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 TMED9Q9BVK6 235 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 FUNDC2Q9BWH2 189 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 SERTAD4Q9NUC0 356 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 STUB1Q9UNE7 303 aa15.29■□□□□ 0.04
CDX1-202ENST00000616154 GABRPO00591 440 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 PSPNO60542 156 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 FBXO24O75426 580 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 GPX5O75715 221 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 GADD45AP24522 165 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 LMO1P25800 156 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 ACSM3Q53FZ2 586 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 ZNF626Q68DY1 528 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 CCBE1Q6UXH8 406 aaPredicted RBP15.28■□□□□ 0.04
CDX1-202ENST00000616154 OR52N4Q8NGI2 321 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 OR13D1Q8NGV5 346 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 TMEM203Q969S6 136 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 MALSU1Q96EH3 234 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 DERL3Q96Q80 235 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 RBM38Q9H0Z9 239 aaKnown RBP15.28■□□□□ 0.04
CDX1-202ENST00000616154 DHDHQ9UQ10 334 aa15.28■□□□□ 0.04
CDX1-202ENST00000616154 A6NDX4 124 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 PIN1P1O15428 100 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 GABARAPO95166 117 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 ARG1P05089 322 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 UCHL1P09936 223 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 OCM2P0CE71 109 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 ZNF728P0DKX0 622 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 ERP29P30040 261 aaKnown RBP15.27■□□□□ 0.04
CDX1-202ENST00000616154 HABP2Q14520 560 aaPredicted RBP15.27■□□□□ 0.04
CDX1-202ENST00000616154 INSL4Q14641 139 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 KISS1Q15726 138 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 FAM189A2Q15884 450 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 TIMM50Q3ZCQ8 353 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 PLA1AQ53H76 456 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 GDPD3Q7L5L3 318 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 REC114Q7Z4M0 266 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 OR11H6Q8NGC7 330 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 OR14A2Q96R54 314 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 OR51E2Q9H255 320 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 ABCB10Q9NRK6 738 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 PITPNC1Q9UKF7 332 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 LINC00312Q9Y6C7 94 aa15.27■□□□□ 0.04
CDX1-202ENST00000616154 MGST3O14880 152 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 OCMP0CE72 109 aaPredicted RBP15.26■□□□□ 0.03
CDX1-202ENST00000616154 CD28P10747 220 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 PRKACAP17612 351 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 FSTP19883 344 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 MAPK3P27361 379 aaPredicted RBP15.26■□□□□ 0.03
CDX1-202ENST00000616154 RAB13P51153 203 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 LDLRAD2Q5SZI1 272 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 ELP2Q6IA86 826 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 Q6ZPA2 131 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 LYG1Q8N1E2 194 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 Q8NFD4 153 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 PXT1Q8NFP0 134 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 OR4S1Q8NGB4 309 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 WIPF2Q8TF74 440 aaPredicted RBP15.26■□□□□ 0.03
CDX1-202ENST00000616154 TSEN15Q8WW01 171 aaKnown RBP15.26■□□□□ 0.03
CDX1-202ENST00000616154 TMEM106AQ96A25 262 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 RFT1Q96AA3 541 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 SPACA5Q96QH8 159 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 BCL7BQ9BQE9 202 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 PPIL3Q9H2H8 161 aaKnown RBP15.26■□□□□ 0.03
CDX1-202ENST00000616154 GLS2Q9UI32 602 aa15.26■□□□□ 0.03
CDX1-202ENST00000616154 hADV38S2A0JD32 116 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms