RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 NOTCH4Q99466 2003 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 F5P12259 2224 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 TUBAL3A6NHL2 446 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 ACP1P24666 158 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 RPL19P84098 196 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 TNFAIP6P98066 277 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 COL10A1Q03692 680 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 OR10P1Q8NGE3 313 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 C10orf35Q96D05 121 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 SCN8AQ9UQD0 1980 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 DOCK9Q9BZ29 2069 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 EFNA2O43921 213 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 CST4P01036 141 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 S100A12P80511 92 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 PLAC9Q5JTB6 97 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 C22orf15Q8WYQ4 148 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 WNT2BQ93097 391 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 RAB39BQ96DA2 213 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 GMPPAQ96IJ6 420 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 ONECUT1Q9UBC0 465 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 GAB2Q9UQC2 676 aa7.74□□□□□ -1.17
PDLIM5-222ENST00000615540 KNL1Q8NG31 2342 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 OR5H1A6NKK0 313 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 CD37P11049 281 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 MDH2P40926 338 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 KLF3P57682 345 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 MRPL14Q6P1L8 145 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 MITD1Q8WV92 249 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 ARV1Q9H2C2 271 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 MED9Q9NWA0 146 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 TNFSF18Q9UNG2 199 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 KPTNQ9Y664 436 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 TMEM50BP56557 158 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 SSTP61278 116 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 RTL8BQ17RB0 113 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 IL34Q6ZMJ4 242 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 UBAC2Q8NBM4 344 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 LYZL4Q96KX0 146 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 DEFA4P12838 97 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 FAM3AP98173 230 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 C1orf100Q5SVJ3 147 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 Q8IYB0 196 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 PIK3IP1Q96FE7 263 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 C5orf66Q9H5L9 145 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 A8MXE2 369 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 CDRT15L2A8MXV6 281 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 CRYABP02511 175 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 CYC1P08574 325 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 C4orf17Q53FE4 359 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 FAHD2BQ6P2I3 314 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 FAHD2AQ96GK7 314 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 OR10C1Q96KK4 312 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 GNB4Q9HAV0 340 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 TMED3Q9Y3Q3 217 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 MPC1Q9Y5U8 109 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 OBSL1O75147 1896 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 LTBP2Q14767 1821 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 TRGV10A0A0A0MS01 117 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 CYB5BO43169 146 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 APOA2P02652 100 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 ERVS71-1P61550 626 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 LIAT1Q6ZQX7 453 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 LYG1Q8N1E2 194 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 BVESQ8NE79 360 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 OR52L2PQ8NGH6 319 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 TMEM68Q96MH6 324 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 DEPPQ9NTK1 212 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 OSGIN2Q9Y236 505 aa7.73□□□□□ -1.17
PDLIM5-222ENST00000615540 ZNF705GA8MUZ8 300 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 CYTIPO60759 359 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 TAS2R30P59541 319 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 CEACAM21Q3KPI0 293 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 PTX4Q96A99 478 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 CHST1O43916 411 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 GUK1Q16774 197 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 ADAM5Q6NVV9 412 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 MRGPRFQ96AM1 343 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 OR5B21A6NL26 309 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 F6UZH7 168 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 CNIH1O95406 144 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 RAB5CP51148 216 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 TIPARPQ7Z3E1 657 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 OR52M1Q8NGK5 317 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 GNPNAT1Q96EK6 184 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 ZNF703Q9H7S9 590 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 FANCMQ8IYD8 2048 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 HLA-DRB3P79483 266 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 NHLH2Q02577 135 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 FDX2Q6P4F2 183 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 KCNIP4Q6PIL6 250 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 ZNF524Q96C55 264 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 FHL1Q13642 323 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 ASPHD2Q6ICH7 369 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 OR2C3Q8N628 320 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 DHRS9Q9BPW9 319 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 OR1A1Q9P1Q5 309 aa7.72□□□□□ -1.17
PDLIM5-222ENST00000615540 KIAA1549LQ6ZVL6 1849 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 SYNGR3O43761 229 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 PPP1CCP36873 323 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 ID4P47928 161 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms