RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 FAM90A18PA6NE21 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A16PA6NEW6 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A20PA6NIJ5 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A8PA6NJQ4 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A7PA6NKC0 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF729A6NN14 1252 aaPredicted RBP9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF724A8MTY0 619 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A22PA8MWA6 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A12PA8MX19 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A5PA8MXJ8 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A23PA8MXZ1 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FCGR3AP08637 254 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A15PP0C7V4 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A13PP0C7W8 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A14PP0C7W9 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM90A24PP0C7X0 464 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 Q6ZS49 121 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR13G1Q8NGZ3 307 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RTBDNQ9BSG5 229 aaPredicted RBP9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 DEPPQ9NTK1 212 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 METTL1Q9UBP6 276 aaKnown RBP9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PIGLQ9Y2B2 252 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 MEMO1Q9Y316 297 aa9.39□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 C5orf63A6NC05 138 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HSPB6O14558 160 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SOD3P08294 240 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RPS2P15880 293 aaKnown RBP9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF708P17019 499 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 BMP5P22003 454 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RPS23P62266 143 aaKnown RBP9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HGFACQ04756 655 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GGNBP1Q5YKI7 109 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 WDR25Q64LD2 544 aaPredicted RBP9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 LYZL2Q7Z4W2 148 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 DTX1Q86Y01 620 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TMEM105Q8N8V8 129 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RNASE11Q8TAA1 199 aaKnown RBP9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RBM24Q9BX46 236 aaKnown RBP9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR2H1Q9GZK4 316 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GPR35Q9HC97 309 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 C19orf12Q9NSK7 152 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 P4HTMQ9NXG6 502 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 LUZP4Q9P127 313 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 DOCK11Q5JSL3 2073 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 AHCTF1Q8WYP5 2266 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CCDC187A0A096LP49 1063 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FAM24AA6NFZ4 105 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 C9orf172C9J069 976 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SLC34A2O95436 690 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TCN2P20062 427 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 EPHA1P21709 976 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 EIF5AP63241 154 aaKnown RBP9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 KHDC3LQ587J8 217 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR1J1Q8NGS3 322 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR10D3Q8NH80 312 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 EMG1Q92979 244 aaKnown RBP9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PRRX2Q99811 253 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF581Q9P0T4 197 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 IGKV1D-8A0A087WSZ0 117 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 A0A0G2JMM0 328 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 A0A1W2PPB8 328 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 A0A1W2PRS3 328 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 KIR3DP1A8MWS1 328 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TSTD3H0UI37 97 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HLA-HP01893 362 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SP9P0CG40 484 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 AGAP20933 346 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CHATP28329 748 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 MPLP40238 635 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RAB11AP62491 216 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SUPT4H1P63272 117 aaKnown RBP9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RHEBQ15382 184 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SAXO1Q8IYX7 474 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR2G3Q8NGZ4 309 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 OR14L1PQ8NHC6 308 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 BCO1Q9HAY6 547 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GAB2Q9UQC2 676 aa9.38□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 hCG_38984A0A1B0GV85 526 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TCAPO15273 167 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 NEURL1O76050 574 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PET100P0DJ07 73 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PGA5P0DJD9 388 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 LHX2P50458 406 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FGF8P55075 233 aaPredicted RBP9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 TAF9Q16594 264 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 SNAI3Q3KNW1 292 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 FBXW12Q6X9E4 464 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 AAED1Q7RTV5 226 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RAB39BQ96DA2 213 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 WNT5BQ9H1J7 359 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 ZNF703Q9H7S9 590 aaPredicted RBP9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 PLEK2Q9NYT0 353 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 HEATR1Q9H583 2144 aaKnown RBP9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 BORCS7-ASMTA0A0B4J1R7 106 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 IGHV3-15A0A0B4J1V0 119 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 GATCO43716 136 aaKnown RBP9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 CST4P01036 141 aa9.37□□□□□ -0.91
SENP3-EIF4A1-201ENST00000614237 RFPL3SP0C7P2 107 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms