RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 NDUFS8O00217 210 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 DXOO77932 396 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 SPINK9Q5DT21 86 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 PLAC9Q5JTB6 97 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 PHYHD1Q5SRE7 291 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 OR2M7Q8NG81 312 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 TMEM230Q96A57 120 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 OR51I2Q9H344 312 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 SIRT7Q9NRC8 400 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 LOC390937A0A1W2PQ73 354 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 PRF1P14222 555 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 FABP4P15090 132 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 RPL7L1Q6DKI1 246 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 KLHDC1Q8N7A1 406 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 RAB40CQ96S21 281 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 ZNF835Q9Y2P0 537 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 SBF2Q86WG5 1849 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 TSPAN2O60636 221 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 UPK3AO75631 287 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 ACTL6AO96019 429 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 HRASP01112 189 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 TLE1Q04724 770 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 BTNL8Q6UX41 500 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 AMELYQ99218 206 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 NCOR1P1Q9H4R4 102 aa10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 LSM2Q9Y333 95 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-206ENST00000612899 TTRP02766 147 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 OPN1MWP04001 364 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 HOXD4P09016 255 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 OPN1MW2P0DN77 364 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 OPN1MW3P0DN78 364 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 MPGP29372 298 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 DDTP30046 118 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 KIR3DL2P43630 455 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 RPL29P47914 159 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 PJVKQ0ZLH3 352 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 GPR137Q96N19 417 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 ALX4Q9H161 411 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 PPP1R3EQ9H7J1 279 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 PARP14Q460N5 1801 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 MED12Q93074 2177 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 PTBP3O95758 552 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 TMEM33P57088 247 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 BPIFB3P59826 476 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 SLC38A11Q08AI6 406 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 CTDSP1Q9GZU7 261 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 SLC26A1Q9H2B4 701 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 GHITMQ9H3K2 345 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 HES4Q9HCC6 221 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 WSB1Q9Y6I7 421 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 TCF21O43680 179 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 COX7A2P2O60397 106 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 CIDEAO60543 219 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 CTSDP07339 412 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 CYC1P08574 325 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 SFTA3P0C7M3 94 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 NTF3P20783 257 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 KLF9Q13886 244 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 PIGYQ3MUY2 71 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 FAM219AQ8IW50 185 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 RPS4Y2Q8TD47 263 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 APOBEC4Q8WW27 367 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 POM121Q96HA1 1249 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 LRFN3Q9BTN0 628 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 NTMQ9P121 344 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 CACFD1Q9UGQ2 172 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 OPN4Q9UHM6 478 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 MYO16Q9Y6X6 1858 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 TMEM218A2RU14 115 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 HMSDA8MTL9 139 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 AGFG2O95081 481 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 ZNF17P17021 662 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 VMA21Q3ZAQ7 101 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 ZNF596Q8TC21 504 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 RAB24Q969Q5 203 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 NTNG2Q96CW9 530 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 OPN3Q9H1Y3 402 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 MYOZ1Q9NP98 299 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 IL17BQ9UHF5 180 aa10.97□□□□□ -0.65
TNFAIP3-206ENST00000612899 CRHP06850 196 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 MDH2P40926 338 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 CTAG1AP78358 180 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 OR11H7Q8NGC8 314 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 CHST5Q9GZS9 411 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 MS4A7Q9GZW8 240 aaPredicted RBP10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 SCN4AP35499 1836 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 TMEM210A6NLX4 147 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 GABRA1P14867 456 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 HFEQ30201 348 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 ZNF528Q3MIS6 628 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 IL36GQ9NZH8 169 aa10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 MRPS18BQ9Y676 258 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-206ENST00000612899 RNF224P0DH78 156 aa10.96□□□□□ -0.66
TNFAIP3-206ENST00000612899 SMIM10L1P0DMW3 83 aa10.96□□□□□ -0.66
TNFAIP3-206ENST00000612899 RELQ04864 619 aaPredicted RBP10.96□□□□□ -0.66
TNFAIP3-206ENST00000612899 SMIM10Q96HG1 83 aa10.96□□□□□ -0.66
TNFAIP3-206ENST00000612899 CXXC4Q9H2H0 198 aa10.96□□□□□ -0.66
TNFAIP3-206ENST00000612899 SLC2A9Q9NRM0 540 aa10.96□□□□□ -0.66
TNFAIP3-206ENST00000612899 CACNA1HO95180 2353 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms