RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 K7ESF4 209 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 CHST1O43916 411 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 TK1P04183 234 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 TAGLN2P37802 199 aaKnown RBP12.1□□□□□ -0.47
COL6A1-207ENST00000612273 NDUFA6P56556 154 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 C4orf17Q53FE4 359 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 GLRX2Q9NS18 164 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 FAM86C1Q9NVL1 165 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 EXPH5Q8NEV8 1989 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 PINLYPA6NC86 204 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 ZFP92A6NM28 416 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 H7C1Q1 480 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
COL6A1-207ENST00000612273 RRP8O43159 456 aaKnown RBP12.1□□□□□ -0.47
COL6A1-207ENST00000612273 SYNGR1O43759 233 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 HEXAP06865 529 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 RTL6Q6ICC9 239 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 ZNF561Q8N587 486 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 AGBL5Q8NDL9 886 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 MOB3AQ96BX8 217 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 BOD1Q96IK1 185 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 C18orf12Q96KH6 178 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 PBDC1Q9BVG4 233 aa12.1□□□□□ -0.47
COL6A1-207ENST00000612273 IAPPP10997 89 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 FOLR3P41439 243 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 FGF8P55075 233 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-207ENST00000612273 B2MP61769 119 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 ZNF674Q2M3X9 581 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 LCN15Q6UWW0 184 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 TMEM252Q8N6L7 170 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 CYB561D1Q8N8Q1 229 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 CCDC71LQ8N9Z2 235 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 CPNE4Q96A23 557 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-207ENST00000612273 SGCZQ96LD1 299 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 GTF3C1Q12789 2109 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 LOC102725191A0A1B0GVB3 256 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 C5orf52A6NGY3 159 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 ARGFXA6NJG6 315 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 TOX3O15405 576 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-207ENST00000612273 MRPL33O75394 65 aaKnown RBP12.09□□□□□ -0.47
COL6A1-207ENST00000612273 FUT6P51993 359 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 UBE2KP61086 200 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 ARF1P84077 181 aaKnown RBP12.09□□□□□ -0.47
COL6A1-207ENST00000612273 CLEC12BQ2HXU8 276 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 THNSL2Q86YJ6 484 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 TCEAL3Q969E4 200 aa12.09□□□□□ -0.47
COL6A1-207ENST00000612273 NOSIPQ9Y314 301 aaKnown RBP12.09□□□□□ -0.47
COL6A1-207ENST00000612273 ZNF816-ZNF321PA0A0X1KG74 233 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 hCG_38984A0A1B0GV85 526 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 ZNF732B4DXR9 585 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 DTYMKP23919 212 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 ECI1P42126 302 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 RND3P61587 244 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.47
COL6A1-207ENST00000612273 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.47
COL6A1-207ENST00000612273 GALNT14Q96FL9 552 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 PRRG4Q9BZD6 226 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 GPR35Q9HC97 309 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 GSN-AS1Q9NRJ2 163 aa12.08□□□□□ -0.47
COL6A1-207ENST00000612273 ROS1P08922 2347 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 PROB1E7EW31 1015 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 LILRA1O75019 489 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 IFNA4P05014 189 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 SELEP16581 610 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 RPS23P62266 143 aaKnown RBP12.08□□□□□ -0.48
COL6A1-207ENST00000612273 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.48
COL6A1-207ENST00000612273 OR1K1Q8NGR3 316 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 OR1J1Q8NGS3 322 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 LILRB1Q8NHL6 650 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-207ENST00000612273 HPSE2Q8WWQ2 592 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 GINS3Q9BRX5 216 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 SCRT1Q9BWW7 348 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 GNG13Q9P2W3 67 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 SPTBN2O15020 2390 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 A0A087WZY1 265 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 ZNF716A6NP11 495 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 H3BQ15 152 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 CLN5O75503 358 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 HIST1H3AP68431 136 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 PRDX4Q13162 271 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 HIST2H3PS2Q5TEC6 136 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 HIST2H3AQ71DI3 136 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 RSG1Q9BU20 258 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 ZNF552Q9H707 407 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-207ENST00000612273 HSF4Q9ULV5 492 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 POMT1Q9Y6A1 747 aa12.08□□□□□ -0.48
COL6A1-207ENST00000612273 MED13Q9UHV7 2174 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 RBFOX3A6NFN3 312 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 OR8U8P0C7N1 319 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 OR2B11Q5JQS5 317 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 ACER2Q5QJU3 275 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 GGNQ86UU5 652 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 OR2Y1Q8NGV0 311 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 C12orf49Q9H741 205 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 PLA2G3Q9NZ20 509 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 TMED3Q9Y3Q3 217 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 Q0VFX4 171 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms