RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ZNF626Q68DY1 528 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 AWAT2Q6E213 333 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 IZUMO2Q6UXV1 221 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 OR11H6Q8NGC7 330 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 OR4C13Q8NGP0 309 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 OR13C5Q8NGS8 318 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 UFD1Q92890 307 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 MRPS24Q96EL2 167 aaKnown RBP10.04□□□□□ -0.8
CBWD3-208ENST00000612050 PGLYRP3Q96LB9 341 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 CDCA4Q9BXL8 241 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 ANKRD60Q9BZ19 345 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 MRPS28Q9Y2Q9 187 aaKnown RBP10.04□□□□□ -0.8
CBWD3-208ENST00000612050 RNF114Q9Y508 228 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 SIRT4Q9Y6E7 314 aaPredicted RBP10.04□□□□□ -0.8
CBWD3-208ENST00000612050 IGHV2-26A0A0B4J1V2 119 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 F2RL2O00254 374 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 CDRT1O95170 752 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 MAS1P04201 325 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 IGFBP3P17936 291 aaPredicted RBP10.03□□□□□ -0.8
CBWD3-208ENST00000612050 CDK2P24941 298 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 GLP1RP43220 463 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 GLIPR1P48060 266 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 DLX6P56179 175 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 RBM11P57052 281 aaKnown RBP10.03□□□□□ -0.8
CBWD3-208ENST00000612050 RBM39Q14498 530 aaKnown RBP10.03□□□□□ -0.8
CBWD3-208ENST00000612050 SLC22A6Q4U2R8 563 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 ATAD3CQ5T2N8 411 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 ASPHD2Q6ICH7 369 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 HCP5Q6MZN7 132 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 Q6P435 159 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 C11orf88Q6PI97 169 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 BRICD5Q6PL45 260 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 HEPN1Q6WQI6 88 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 C11orf42Q8N5U0 333 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 OR10K1Q8NGX5 313 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 CORO2AQ92828 525 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 NPFFR1Q9GZQ6 430 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 FKBP14Q9NWM8 211 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 GHRLQ9UBU3 117 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 DSCAML1Q8TD84 2053 aa10.03□□□□□ -0.8
CBWD3-208ENST00000612050 A0A1W2PPK0 400 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 HSMCR30P0CW71 290 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 PSMA1P25786 263 aaKnown RBP10.02□□□□□ -0.81
CBWD3-208ENST00000612050 BRS3P32247 399 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 GPR50Q13585 617 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 SSX2Q16385 188 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 LY6EQ16553 131 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 PIGYQ3MUY2 71 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 ARSJQ5FYB0 599 aaPredicted RBP10.02□□□□□ -0.81
CBWD3-208ENST00000612050 NHLRC3Q5JS37 347 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 RBM48Q5RL73 367 aaKnown RBP10.02□□□□□ -0.81
CBWD3-208ENST00000612050 GLT8D1Q68CQ7 371 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 ASCL4Q6XD76 172 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 ABHD12Q8N2K0 398 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 ZNF485Q8NCK3 441 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 OR2T6Q8NHC8 308 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 NRG4Q8WWG1 115 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 MUL1Q969V5 352 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 AKR1E2Q96JD6 320 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 CNBD2Q96M20 576 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 DERL3Q96Q80 235 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 UQCC2Q9BRT2 126 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 TMED9Q9BVK6 235 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 DPCDQ9BVM2 203 aaPredicted RBP10.02□□□□□ -0.81
CBWD3-208ENST00000612050 CST11Q9H112 138 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 NCOR1P1Q9H4R4 102 aa10.02□□□□□ -0.81
CBWD3-208ENST00000612050 AMMECR1Q9Y4X0 333 aaPredicted RBP10.02□□□□□ -0.81
CBWD3-208ENST00000612050 TRBV5-7A0A0A0MS05 114 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 TMEM30CPA0ZSE6 113 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 ODF3BA8MYP8 253 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 LEUTXA8MZ59 168 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 MCRIP1C9JLW8 97 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 TIMM23O14925 209 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 PEX14O75381 377 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 UBBP0CG47 229 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 NFYBP25208 207 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 MNDAP41218 407 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 RPS11P62280 158 aaKnown RBP eCLIP10.01□□□□□ -0.81
CBWD3-208ENST00000612050 SLC35A2P78381 396 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 ACSM3Q53FZ2 586 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 PRAMEF5Q5TYX0 476 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 LAIR2Q6ISS4 152 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 CCDC144NLQ6NUI1 221 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 GLIPR1L1Q6UWM5 242 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 RNF144BQ7Z419 303 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 Q8NFD4 153 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 RANBP3Q9H6Z4 567 aaPredicted RBP10.01□□□□□ -0.81
CBWD3-208ENST00000612050 IFT22Q9H7X7 185 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 KIF25Q9UIL4 384 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 RAB26Q9ULW5 256 aa10.01□□□□□ -0.81
CBWD3-208ENST00000612050 TRAV8-7A0A075B6U6 113 aa10□□□□□ -0.81
CBWD3-208ENST00000612050 KBTBD11-OT1A0A1B0GTJ5 212 aa10□□□□□ -0.81
CBWD3-208ENST00000612050 FAM90A8PA6NJQ4 464 aa10□□□□□ -0.81
CBWD3-208ENST00000612050 VGLL3A8MV65 326 aa10□□□□□ -0.81
CBWD3-208ENST00000612050 CRTAPO75718 401 aaPredicted RBP10□□□□□ -0.81
CBWD3-208ENST00000612050 ARL6IP5O75915 188 aa10□□□□□ -0.81
CBWD3-208ENST00000612050 GZMHP20718 246 aa10□□□□□ -0.81
CBWD3-208ENST00000612050 GABRA5P31644 462 aa10□□□□□ -0.81
CBWD3-208ENST00000612050 VHLP40337 213 aa10□□□□□ -0.81
CBWD3-208ENST00000612050 HSD17B12Q53GQ0 312 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms