RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TMEM249Q2WGJ8 235 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 BTN2A1Q7KYR7 527 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 GDPD3Q7L5L3 318 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 OR4M1Q8NGD0 313 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 RAB3CQ96E17 227 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 COX4I2Q96KJ9 171 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 NEDD4LQ96PU5 975 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 HDHD3Q9BSH5 251 aaPredicted RBP6.36□□□□□ -1.39
MSH6-211ENST00000606499 FAAP24Q9BTP7 215 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 PECRQ9BY49 303 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 FAM234AQ9H0X4 552 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 ABCG5Q9H222 651 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 SPACA1Q9HBV2 294 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 C19orf12Q9NSK7 152 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 AK3Q9UIJ7 227 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 ELF5Q9UKW6 265 aaPredicted RBP6.36□□□□□ -1.39
MSH6-211ENST00000606499 DSCAML1Q8TD84 2053 aa6.36□□□□□ -1.39
MSH6-211ENST00000606499 NSD1Q96L73 2696 aaPredicted RBP6.35□□□□□ -1.39
MSH6-211ENST00000606499 NF1P21359 2839 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 TRAV18A0A075B6X5 111 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 TRAV39A0A0B4J263 110 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 TMEM235A6NFC5 223 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 A8MXK9 166 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 FAM25AB3EWG3 89 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 FAM25CB3EWG5 89 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 FAM25GB3EWG6 89 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 MFNGO00587 321 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 MSMBP08118 114 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 PTHLHP12272 177 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 NPY4RP50391 375 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 TAS2R20P59543 309 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 PAX2Q02962 417 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 FAM189A2Q15884 450 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 CDNFQ49AH0 187 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 KRBOX4Q5JUW0 171 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 TMEM69Q5SWH9 247 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 RSBN1Q5VWQ0 802 aaPredicted RBP6.35□□□□□ -1.39
MSH6-211ENST00000606499 CNIH2Q6PI25 160 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 SPNS3Q6ZMD2 512 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 ZNF497Q6ZNH5 498 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 Q6ZPA2 131 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 Q6ZTK2 550 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 TCF23Q7RTU1 214 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 FAM185AQ8N0U4 392 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 RAB40AQ8WXH6 277 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 GCDHQ92947 438 aaPredicted RBP6.35□□□□□ -1.39
MSH6-211ENST00000606499 PHF21AQ96BD5 680 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 MSI2Q96DH6 328 aaKnown RBP6.35□□□□□ -1.39
MSH6-211ENST00000606499 S100A16Q96FQ6 103 aaKnown RBP6.35□□□□□ -1.39
MSH6-211ENST00000606499 POM121Q96HA1 1249 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 C1orf159Q96HA4 380 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 DCTN5Q9BTE1 182 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 PLEKHJ1Q9NW61 149 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 ETAA1Q9NY74 926 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 EXTL2Q9UBQ6 330 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 KIF25Q9UIL4 384 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 RPUSD1Q9UJJ7 312 aaKnown RBP6.35□□□□□ -1.39
MSH6-211ENST00000606499 HSF4Q9ULV5 492 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 KCNK7Q9Y2U2 307 aa6.35□□□□□ -1.39
MSH6-211ENST00000606499 NIPBLQ6KC79 2804 aaeCLIP6.34□□□□□ -1.39
MSH6-211ENST00000606499 LOC105371242A0A075B767 164 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 MEIKINA0A087WXM9 373 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 A0A0A6YYH2 397 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 IGHV2-70DA0A0C4DH43 119 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 A0A1W2PQ09 198 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 TMEM30CPA0ZSE6 113 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 ODAMA1E959 279 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 A6NJ64 397 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 B4DSR2 109 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 GPR37O15354 613 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 XRCC3O43542 346 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 FOXH1O75593 365 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 CLPXO76031 633 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 SCGNO76038 276 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 GLAP06280 429 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 TNFSF8P32971 234 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 GLP1RP43220 463 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 KCNJ3P48549 501 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 RPL31P62899 125 aaKnown RBP6.34□□□□□ -1.39
MSH6-211ENST00000606499 KRTAP1-1Q07627 177 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 RBM39Q14498 530 aaKnown RBP6.34□□□□□ -1.39
MSH6-211ENST00000606499 ZNF273Q14593 569 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 ZNF260Q3ZCT1 412 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 TMEM200BQ69YZ2 307 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 SLC35E4Q6ICL7 350 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 LINC01356Q8N9X3 169 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 OR5D13Q8NGL4 314 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 OR13A1Q8NGR1 328 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 OR4K15Q8NH41 348 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 PPP1R35Q8TAP8 253 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 MRPL30Q8TCC3 161 aaKnown RBP6.34□□□□□ -1.39
MSH6-211ENST00000606499 CCDC107Q8WV48 283 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 NUDCD2Q8WVJ2 157 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 DACT3Q96B18 629 aaPredicted RBP6.34□□□□□ -1.39
MSH6-211ENST00000606499 CMTM3Q96MX0 182 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 MMP27Q9H306 513 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 AUNIPQ9H7T9 357 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 CHMP1AQ9HD42 196 aaPredicted RBP6.34□□□□□ -1.39
MSH6-211ENST00000606499 C12orf4Q9NQ89 552 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 DIABLOQ9NR28 239 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms