RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CD200R1LQ6Q8B3 271 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM64Q6YI46 380 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC25A26Q70HW3 274 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 UBALD2Q8IYN6 164 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 PLPP5Q8NEB5 264 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 OR2T29Q8NH02 315 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 THEM6Q8WUY1 208 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 ATG5Q9H1Y0 275 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 WDR13Q9H1Z4 485 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 TAS2R16Q9NYV7 291 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 OR1A1Q9P1Q5 309 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 TNFSF18Q9UNG2 199 aa4.31□□□□□ -1.72
SPTBN1-206ENST00000602898 ARID2Q68CP9 1835 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 TRBV9A0A0B4J1U6 114 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 A0A1W2PRF3 423 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 A0A1W2PRM7 423 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 OR5B21A6NL26 309 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 PHF1O43189 567 aaPredicted RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 GSTZ1O43708 216 aaPredicted RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 LRATO95237 230 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 CATP04040 527 aaKnown RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 FCGR3AP08637 254 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 MMP7P09237 267 aaPredicted RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ZGLP1P0C6A0 271 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 IMPA1P29218 277 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 CLDN15P56746 228 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 H2BFSP57053 126 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 MTPNP58546 118 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 S100A10P60903 97 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 RPS13P62277 151 aaKnown RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 TBPL1P62380 186 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 H3F3AP84243 136 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 HLA-DQA1Q5Y7H0 255 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM42Q69YG0 159 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 MBOAT2Q6ZWT7 520 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 NIT1Q86X76 327 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC35F2Q8IXU6 374 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC39A11Q8N1S5 342 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 STPG4Q8N801 248 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 OR5D16Q8NGK9 328 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 C11orf45Q8TAV5 145 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF519Q8TB69 540 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 RXFP2Q8WXD0 754 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM18Q96B42 140 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 CIB3Q96Q77 187 aaPredicted RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 PRR25Q96S07 402 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 DNAJC15Q9Y5T4 150 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 MYO18AQ92614 2054 aaKnown RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 SPRY3O43610 288 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ALOX12BO75342 701 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 CD8AP01732 235 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 TRGC2P03986 189 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ISG15P05161 165 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 EPCAMP16422 314 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 GABRG2P18507 467 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ADORA2BP29275 332 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 RPL13AP40429 203 aaKnown RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 OPRD1P41143 372 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 RPS4XP62701 263 aaKnown RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC35B1P78383 322 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 KLF5Q13887 457 aaPredicted RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ELOBQ15370 118 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 POU2AF1Q16633 256 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM183BQ1AE95 376 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 TECRLQ5HYJ1 363 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 GLT8D1Q68CQ7 371 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 OR4C11Q6IEV9 310 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 APRG1Q8IVJ8 170 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 C9orf40Q8IXQ3 194 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ABHD12Q8N2K0 398 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 OR52L1Q8NGH7 329 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 BADQ92934 168 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 TSLPQ969D9 159 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 MRAP2Q96G30 205 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 SIGMAR1Q99720 223 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF670Q9BS34 389 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 POLR2J2Q9GZM3 115 aaKnown RBP4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF226Q9NYT6 803 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC23A2Q9UGH3 650 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 RFNGQ9Y644 331 aa4.3□□□□□ -1.72
SPTBN1-206ENST00000602898 PDCD11Q14690 1871 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 GBF1Q92538 1859 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 TRAV14DV4A0A0A6YYC5 116 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 NSG1A0A0A6YYJ2 146 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 TRDV1A0A1B0GX56 115 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 SCO2A0A1W2PP80 73 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 AGPAT2O15120 278 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 UBL3O95164 117 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 SOD1P00441 154 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 THY1P04216 161 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 FAM157CP0CG43 387 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 GPD1P21695 349 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 CHATP28329 748 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 NSG1P42857 185 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 RAB38P57729 211 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC35A1P78382 337 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 GGTLC2Q14390 218 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 TEAD2Q15562 447 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 TRNP1Q6NT89 227 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms