RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GINS4Q9BRT9 223 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 C20orf85Q9H1P6 137 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 Q9N2K0 584 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 TMEM106BQ9NUM4 274 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 FAM208BQ5VWN6 2430 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 IGKV1D-8A0A087WSZ0 117 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 IGHV1-69-2A0A0G2JMI3 117 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 OOEPA6NGQ2 149 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 DANCRP0C864 163 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 RAG2P55895 527 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 ATXN7L3Q14CW9 347 aaPredicted RBP15.09■□□□□ 0.01
VRK3-225ENST00000601912 CDK10Q15131 360 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 GRK1Q15835 563 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 FAM201AQ5SY85 155 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 ZNF497Q6ZNH5 498 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 DTX2Q86UW9 622 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 ANGPTL6Q8NI99 470 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 MRPL30Q8TCC3 161 aaKnown RBP15.09■□□□□ 0.01
VRK3-225ENST00000601912 UBTD1Q9HAC8 227 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 NECAP2Q9NVZ3 263 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 EHFQ9NZC4 300 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 TRAV38-1A0A0B4J264 116 aa15.08■□□□□ 0
VRK3-225ENST00000601912 KIR2DS1A0A191URI9 304 aa15.08■□□□□ 0
VRK3-225ENST00000601912 TMEM178BH3BS89 294 aa15.08■□□□□ 0
VRK3-225ENST00000601912 CD8AP01732 235 aa15.08■□□□□ 0
VRK3-225ENST00000601912 HPXP02790 462 aa15.08■□□□□ 0
VRK3-225ENST00000601912 SOD3P08294 240 aa15.08■□□□□ 0
VRK3-225ENST00000601912 KIR2DS4P43632 304 aa15.08■□□□□ 0
VRK3-225ENST00000601912 KIR2DS1Q14954 304 aa15.08■□□□□ 0
VRK3-225ENST00000601912 HFEQ30201 348 aa15.08■□□□□ 0
VRK3-225ENST00000601912 TEX36Q5VZQ5 186 aa15.08■□□□□ 0
VRK3-225ENST00000601912 C11orf71Q6IPW1 123 aa15.08■□□□□ 0
VRK3-225ENST00000601912 OVCH2Q7RTZ1 564 aa15.08■□□□□ 0
VRK3-225ENST00000601912 TGIF2LYQ8IUE0 185 aa15.08■□□□□ 0
VRK3-225ENST00000601912 PLPPR1Q8TBJ4 325 aa15.08■□□□□ 0
VRK3-225ENST00000601912 ING3Q9NXR8 418 aa15.08■□□□□ 0
VRK3-225ENST00000601912 MGAT4AQ9UM21 535 aa15.08■□□□□ 0
VRK3-225ENST00000601912 PPIAL4EA0A075B759 164 aa15.07■□□□□ 0
VRK3-225ENST00000601912 A0A1W2PPR1 153 aa15.07■□□□□ 0
VRK3-225ENST00000601912 TMEM30CPA0ZSE6 113 aa15.07■□□□□ 0
VRK3-225ENST00000601912 FUOMA2VDF0 154 aa15.07■□□□□ 0
VRK3-225ENST00000601912 PPIAL4DF5H284 164 aa15.07■□□□□ 0
VRK3-225ENST00000601912 LGALS8O00214 317 aa15.07■□□□□ 0
VRK3-225ENST00000601912 PPIAL4FP0DN26 164 aa15.07■□□□□ 0
VRK3-225ENST00000601912 BCAP31P51572 246 aa15.07■□□□□ 0
VRK3-225ENST00000601912 RAB25P57735 213 aa15.07■□□□□ 0
VRK3-225ENST00000601912 MOB1BQ7L9L4 216 aa15.07■□□□□ 0
VRK3-225ENST00000601912 DEFB108BQ8NET1 73 aa15.07■□□□□ 0
VRK3-225ENST00000601912 SNX22Q96L94 193 aa15.07■□□□□ 0
VRK3-225ENST00000601912 TRAF4Q9BUZ4 470 aaPredicted RBP15.07■□□□□ 0
VRK3-225ENST00000601912 ZNF222Q9UK12 451 aa15.07■□□□□ 0
VRK3-225ENST00000601912 TRAPPC2LQ9UL33 140 aa15.07■□□□□ 0
VRK3-225ENST00000601912 LAMP3Q9UQV4 416 aa15.07■□□□□ 0
VRK3-225ENST00000601912 PPIAL4AQ9Y536 164 aa15.07■□□□□ 0
VRK3-225ENST00000601912 TMEM82A0PJX8 343 aa15.06■□□□□ 0
VRK3-225ENST00000601912 TRDCB7Z8K6 153 aa15.06■□□□□ 0
VRK3-225ENST00000601912 SDCBPO00560 298 aaPredicted RBP15.06■□□□□ 0
VRK3-225ENST00000601912 ZNF205O95201 554 aa15.06■□□□□ 0
VRK3-225ENST00000601912 TFF1P04155 84 aa15.06■□□□□ 0
VRK3-225ENST00000601912 OR3A1P47881 315 aa15.06■□□□□ 0
VRK3-225ENST00000601912 SRSF1Q07955 248 aaKnown RBP eCLIP15.06■□□□□ 0
VRK3-225ENST00000601912 TATDN3Q17R31 274 aa15.06■□□□□ 0
VRK3-225ENST00000601912 STUMQ69YW2 141 aa15.06■□□□□ 0
VRK3-225ENST00000601912 SLC35E4Q6ICL7 350 aa15.06■□□□□ 0
VRK3-225ENST00000601912 C17orf107Q6ZR85 190 aa15.06■□□□□ 0
VRK3-225ENST00000601912 GAPTQ8N292 157 aa15.06■□□□□ 0
VRK3-225ENST00000601912 ZNF561Q8N587 486 aa15.06■□□□□ 0
VRK3-225ENST00000601912 TERB2Q8NHR7 220 aa15.06■□□□□ 0
VRK3-225ENST00000601912 DCAF16Q9NXF7 216 aa15.06■□□□□ 0
VRK3-225ENST00000601912 METRNQ9UJH8 293 aa15.06■□□□□ 0
VRK3-225ENST00000601912 RALYQ9UKM9 306 aaKnown RBP15.06■□□□□ 0
VRK3-225ENST00000601912 ARPC1BO15143 372 aaKnown RBP15.06■□□□□ 0
VRK3-225ENST00000601912 ZNF737O75373 536 aa15.06■□□□□ 0
VRK3-225ENST00000601912 PEX14O75381 377 aa15.06■□□□□ 0
VRK3-225ENST00000601912 GSTT2P0CG29 244 aa15.06■□□□□ 0
VRK3-225ENST00000601912 OR5H8P0DN80 308 aa15.06■□□□□ 0
VRK3-225ENST00000601912 ZNF880Q6PDB4 577 aa15.06■□□□□ 0
VRK3-225ENST00000601912 C20orf204Q6ZNR8 217 aa15.06■□□□□ 0
VRK3-225ENST00000601912 Q6ZPA2 131 aa15.06■□□□□ 0
VRK3-225ENST00000601912 OR5D13Q8NGL4 314 aa15.06■□□□□ 0
VRK3-225ENST00000601912 OR6F1Q8NGZ6 308 aa15.06■□□□□ 0
VRK3-225ENST00000601912 NEU4Q8WWR8 484 aaPredicted RBP15.06■□□□□ 0
VRK3-225ENST00000601912 SDSLQ96GA7 329 aa15.06■□□□□ 0
VRK3-225ENST00000601912 SHARPINQ9H0F6 387 aa15.06■□□□□ 0
VRK3-225ENST00000601912 ZNF665Q9H7R5 613 aa15.06■□□□□ 0
VRK3-225ENST00000601912 FLVCR2Q9UPI3 526 aa15.06■□□□□ 0
VRK3-225ENST00000601912 USP9XQ93008 2570 aaPredicted RBP15.05■□□□□ 0
VRK3-225ENST00000601912 FLNCQ14315 2725 aa15.05■□□□□ -0
VRK3-225ENST00000601912 FABP7O15540 132 aa15.05■□□□□ -0
VRK3-225ENST00000601912 RLN1P04808 185 aa15.05■□□□□ -0
VRK3-225ENST00000601912 CTXN2P0C2S0 81 aa15.05■□□□□ -0
VRK3-225ENST00000601912 AESQ08117 197 aa15.05■□□□□ -0
VRK3-225ENST00000601912 KRBOX4Q5JUW0 171 aa15.05■□□□□ -0
VRK3-225ENST00000601912 CADM3Q8N126 398 aa15.05■□□□□ -0
VRK3-225ENST00000601912 CCDC107Q8WV48 283 aa15.05■□□□□ -0
VRK3-225ENST00000601912 DLL4Q9NR61 685 aa15.05■□□□□ -0
VRK3-225ENST00000601912 NKX6-3A6NJ46 265 aa15.04■□□□□ -0
VRK3-225ENST00000601912 K7N7A8 449 aa15.04■□□□□ -0
VRK3-225ENST00000601912 MGST3O14880 152 aa15.04■□□□□ -0
VRK3-225ENST00000601912 PFDN1O60925 122 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms