RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 IL2RGP31785 369 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 UCP3P55916 312 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 H2BFSP57053 126 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 PLGLB1Q02325 96 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 COX19Q49B96 90 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 SLC25A42Q86VD7 318 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 ZNF695Q8IW36 515 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 ZNF799Q96GE5 643 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 CST9LQ9H4G1 147 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 CLDN16Q9Y5I7 305 aa9.16□□□□□ -0.94
LIG1-220ENST00000601091 DOCK9Q9BZ29 2069 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 IGLV1-36A0A0B4J1U3 117 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 FSTP19883 344 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 UQCC3Q6UW78 93 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 DRAM2Q6UX65 266 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 MOB3CQ70IA8 216 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 MUC15Q8N387 334 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 DMBX1Q8NFW5 382 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 DOK5Q9P104 306 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 NPTNQ9Y639 398 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 HS3ST1O14792 307 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 ST8SIA3O43173 380 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 CDS2O95674 445 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 ABHD16AO95870 558 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 CST4P01036 141 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 FBXW12Q6X9E4 464 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 ANKRD37Q7Z713 158 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 RPS19BP1Q86WX3 136 aaKnown RBP9.15□□□□□ -0.94
LIG1-220ENST00000601091 OR10G3Q8NGC4 313 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 OR2V1Q8NHB1 315 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 RPS4Y2Q8TD47 263 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 SPSB4Q96A44 273 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 PLXNA4Q9HCM2 1894 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 KNTC1P50748 2209 aa9.15□□□□□ -0.94
LIG1-220ENST00000601091 EPOPA6NHQ4 379 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 K7EP13 123 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 HPP00738 406 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 DBHP09172 617 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 STPG1Q5TH74 334 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 RHBDD2Q6NTF9 364 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 GTF2H5Q6ZYL4 71 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 OR1S1Q8NH92 325 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 SLC39A7Q92504 469 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 ARHGAP5-AS1Q96IT6 56 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 TLNRD1Q9H1K6 362 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 B4GALT7Q9UBV7 327 aa9.15□□□□□ -0.95
LIG1-220ENST00000601091 LIPT2A6NK58 231 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 EPHA1P21709 976 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 KHDC3LQ587J8 217 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 ZNF562Q6V9R5 426 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 MOGAT3Q86VF5 341 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 LRRC75AQ8NAA5 344 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 SLC38A9Q8NBW4 561 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 ZNF738Q8NE65 137 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 PP6455Q8WZ26 134 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 GTSF1LQ9H1H1 148 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 NELFAQ9H3P2 528 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 FLVCR1Q9Y5Y0 555 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 PIGBOS1A0A0B4J2F0 54 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 ZNF891A8MT65 544 aaPredicted RBP9.14□□□□□ -0.95
LIG1-220ENST00000601091 H0Y980 276 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 DHHO43323 396 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 JTBO76095 146 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 VSIG8P0DPA2 414 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 UBE2V1Q13404 147 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 RHEBQ15382 184 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 KISS1Q15726 138 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 FAM58AQ8N1B3 248 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 C20orf24Q9BUV8 137 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 NECAP2Q9NVZ3 263 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
LIG1-220ENST00000601091 ZNF814B7Z6K7 855 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 IGKV3-11P04433 115 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 FAHP16930 419 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 ERVFC1-1P60608 527 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 ZNF660Q6AZW8 331 aaPredicted RBP9.14□□□□□ -0.95
LIG1-220ENST00000601091 MRPL41Q8IXM3 137 aaKnown RBP9.14□□□□□ -0.95
LIG1-220ENST00000601091 SMRP1Q8NCR6 262 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 ASCL2Q99929 193 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 RAB18Q9NP72 206 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 PIPOXQ9P0Z9 390 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 OR2M5A3KFT3 312 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 PRR32B1ATL7 298 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 TK1P04183 234 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 FPR2P25090 351 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 MPLP40238 635 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 SRYQ05066 204 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 ZP4Q12836 540 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 FZD5Q13467 585 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 SHBQ15464 509 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 C5orf64Q2M2E5 130 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 SPEM1Q8N4L4 309 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 OR2Z1Q8NG97 314 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 ZNF519Q8TB69 540 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 SCGB1C1Q8TD33 95 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 PIK3IP1Q96FE7 263 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 OR2J1Q9GZK6 312 aa9.14□□□□□ -0.95
LIG1-220ENST00000601091 COLCA2A8K830 154 aa9.13□□□□□ -0.95
LIG1-220ENST00000601091 OR5H8P0DN80 308 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms