RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 GABARAPL2P60520 117 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 PPP3R1P63098 170 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 QRFPP83859 136 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 AESQ08117 197 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 C17orf58Q2M2W7 97 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 PIGYQ3MUY2 71 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 ACSM3Q53FZ2 586 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 FAM27D1Q5T7N8 215 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 RSBN1Q5VWQ0 802 aaPredicted RBP7.12□□□□□ -1.27
SSBP4-208ENST00000600628 SIGIRRQ6IA17 410 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 NKAIN3Q8N8D7 197 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 OR10K1Q8NGX5 313 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 PPP1R35Q8TAP8 253 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 TAF15Q92804 592 aaKnown RBP eCLIP7.12□□□□□ -1.27
SSBP4-208ENST00000600628 GFI1Q99684 422 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 ZNF747Q9BV97 191 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 TNFRSF19Q9NS68 423 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 C1RLQ9NZP8 487 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 GLS2Q9UI32 602 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 ST3GAL6Q9Y274 331 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 FAM96BQ9Y3D0 163 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 TBL2Q9Y4P3 447 aaKnown RBP7.12□□□□□ -1.27
SSBP4-208ENST00000600628 SESN1Q9Y6P5 492 aa7.12□□□□□ -1.27
SSBP4-208ENST00000600628 PNMA8CA0A1B0GUJ8 204 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 A0A1W2PPK0 400 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 MEIOCA2RUB1 952 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 GEMIN2O14893 280 aaKnown RBP7.11□□□□□ -1.27
SSBP4-208ENST00000600628 DEGS1O15121 323 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 GPR137BO60478 399 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 TSPAN9O75954 239 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 CLPXO76031 633 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 CRYBA1P05813 215 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 OCMP0CE72 109 aaPredicted RBP7.11□□□□□ -1.27
SSBP4-208ENST00000600628 GDNFP39905 211 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 EDDM3BP56851 147 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 EMX1Q04741 257 aaPredicted RBP7.11□□□□□ -1.27
SSBP4-208ENST00000600628 RSU1Q15404 277 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 SSX1Q16384 188 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 MPV17LQ2QL34 196 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 UTF1Q5T230 341 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 LIPKQ5VXJ0 399 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 OSR2Q8N2R0 312 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 TMEM104Q8NE00 496 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 OR4P4Q8NGL7 312 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 OR5R1Q8NH85 324 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 PLPPR1Q8TBJ4 325 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 Q96M66 194 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 GPER1Q99527 375 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 MGLLQ99685 303 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 YTHDF1Q9BYJ9 559 aaKnown RBP7.11□□□□□ -1.27
SSBP4-208ENST00000600628 METTL9Q9H1A3 318 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 TMEM133Q9H2Q1 129 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 PPA2Q9H2U2 334 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 DPAGT1Q9H3H5 408 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 ACOT13Q9NPJ3 140 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 CKLFQ9UBR5 152 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 GHRLQ9UBU3 117 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 VPREB3Q9UKI3 123 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
SSBP4-208ENST00000600628 IGHV2-26A0A0B4J1V2 119 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 KBTBD11-OT1A0A1B0GTJ5 212 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 A0A1B0GUS0 222 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 A0A1W2PRD5 423 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 A0A1W2PRF3 423 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 A0A1W2PRM7 423 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 FUOMA2VDF0 154 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 ZNF729A6NN14 1252 aaPredicted RBP7.1□□□□□ -1.27
SSBP4-208ENST00000600628 LY6LH3BQJ8 138 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 C15orf65H3BRN8 121 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SLC22A1O15245 554 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 HTR3BO95264 441 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 GLAP06280 429 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 GTF2F2P13984 249 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 ZNF44P15621 663 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SRMP19623 302 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 OMGP23515 440 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 PSMA1P25786 263 aaKnown RBP7.1□□□□□ -1.27
SSBP4-208ENST00000600628 MAP2K4P45985 399 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SNU13P55769 128 aaKnown RBP7.1□□□□□ -1.27
SSBP4-208ENST00000600628 RPS25P62851 125 aaKnown RBP7.1□□□□□ -1.27
SSBP4-208ENST00000600628 GPR176Q14439 515 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 EDDM3AQ14507 147 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 MED22Q15528 200 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 TRAM1Q15629 374 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 KRBOX4Q5JUW0 171 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 MINOS1Q5TGZ0 78 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 UBE2UQ5VVX9 321 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SLC35E4Q6ICL7 350 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SHISA2Q6UWI4 295 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 BAIAP2L2Q6UXY1 529 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 ZNF782Q6ZMW2 699 aaPredicted RBP7.1□□□□□ -1.27
SSBP4-208ENST00000600628 ZNF497Q6ZNH5 498 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 LHFPL4Q7Z7J7 247 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SATL1Q86VE3 508 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 FAM89BQ8N5H3 189 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SUMF2Q8NBJ7 301 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 OR13A1Q8NGR1 328 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 OR13D1Q8NGV5 346 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SGMS2Q8NHU3 365 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms