RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SPIN3Q5JUX0 258 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 ZNF660Q6AZW8 331 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 ACP7Q6ZNF0 438 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 NUP37Q8NFH4 326 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 LINC01560Q8TB33 94 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 MRPL24Q96A35 216 aaKnown RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 HES4Q9HCC6 221 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 NGBQ9NPG2 151 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 SLC23A1Q9UHI7 598 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 GLS2Q9UI32 602 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 MGAT4AQ9UM21 535 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 C14orf166Q9Y224 244 aaKnown RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 KALRNO60229 2985 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 A0A1B0GWJ7 208 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 RFPL4AA6NLU0 287 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 CEACAM18A8MTB9 384 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 RFPL4AL1F8VTS6 287 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 PTBP3O95758 552 aaKnown RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 ACAA1P09110 424 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 OR4A8P0C604 315 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 DNASE1P24855 282 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 GRNP28799 593 aaKnown RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 SLC9A3R2Q15599 337 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 DCAF12L2Q5VW00 463 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 FAHD2BQ6P2I3 314 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 PEG10Q86TG7 708 aaKnown RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 MOGAT3Q86VF5 341 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 TMEM185AQ8NFB2 350 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 OR11H4Q8NGC9 324 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 CA5BP1Q8WTZ4 195 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 TMEM230Q96A57 120 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 FAHD2AQ96GK7 314 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 PHB2Q99623 299 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 RIMS4Q9H426 269 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 IFT22Q9H7X7 185 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 PIPOXQ9P0Z9 390 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 NPTNQ9Y639 398 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 ACACBO00763 2458 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 PPP3CBP16298 524 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 CD200P41217 278 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 GLP1RP43220 463 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 SNRPD2P62316 118 aaKnown RBP12.79□□□□□ -0.36
HIF3A-218ENST00000600383 ADORA2A-AS1P86434 159 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 CDSNQ15517 529 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 PCSK4Q6UW60 755 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 PRR18Q8N4B5 295 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 GRPEL2Q8TAA5 225 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 PLPPR1Q8TBJ4 325 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 MEGF10Q96KG7 1140 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 PRR13Q9NZ81 148 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 TREM2Q9NZC2 230 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 FAM25EA8MYX2 175 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 CCSO14618 274 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 PSPNO60542 156 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 GLAP06280 429 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 ZNF728P0DKX0 622 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 SSX8Q7RTT4 187 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 KDF1Q8NAX2 398 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-218ENST00000600383 PRR7Q8TB68 274 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 MITD1Q8WV92 249 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 ESRP2Q9H6T0 727 aaKnown RBP12.79□□□□□ -0.36
HIF3A-218ENST00000600383 NDRG3Q9UGV2 375 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 TRAPPC2LQ9UL33 140 aa12.79□□□□□ -0.36
HIF3A-218ENST00000600383 KIR2DS1A0A191URI9 304 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 ERVH48-1M5A8F1 160 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 OR2A4O95047 310 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 DUS4LO95620 317 aaKnown RBP12.78□□□□□ -0.36
HIF3A-218ENST00000600383 TK1P04183 234 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 GIPP09681 153 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-218ENST00000600383 PLA2G5P39877 138 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 KIR2DS4P43632 304 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 TNFAIP6P98066 277 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-218ENST00000600383 KIR2DS1Q14954 304 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-218ENST00000600383 ADIPOQQ15848 244 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 SMIM21Q3B7S5 101 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 CLEC18BQ6UXF7 455 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
HIF3A-218ENST00000600383 IL1F10Q8WWZ1 152 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 PLPPR2Q96GM1 343 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 OR2A7Q96R45 310 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 CLEC4MQ9H2X3 399 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-218ENST00000600383 HSPB11Q9Y547 144 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 KIAA2026Q5HYC2 2103 aa12.78□□□□□ -0.36
HIF3A-218ENST00000600383 CACNA1DQ01668 2161 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 TMEM8BA6NDV4 472 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 IGHV1-46P01743 117 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 AADACP22760 399 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 RAP2BP61225 183 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 LILRB4Q8NHJ6 448 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 ZFAND1Q8TCF1 268 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 SEC22AQ96IW7 307 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 DNAJB11Q9UBS4 358 aa12.77□□□□□ -0.36
HIF3A-218ENST00000600383 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.37
HIF3A-218ENST00000600383 TEX13DA0A0J9YY54 714 aaPredicted RBP12.77□□□□□ -0.37
HIF3A-218ENST00000600383 EGR1P18146 543 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms