RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 OR51T1Q8NGJ9 327 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 OR13A1Q8NGR1 328 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 OR10AC1Q8NH08 325 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 TMEM163Q8TC26 289 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 MYOZ3Q8TDC0 251 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 PP6455Q8WZ26 134 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 LEAP2Q969E1 77 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 ST6GALNAC6Q969X2 333 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 UTP4Q969X6 686 aaKnown RBP4.77□□□□□ -1.65
VRK3-220ENST00000600259 RPEQ96AT9 228 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 FGGYQ96C11 551 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 ASB9Q96DX5 294 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 NRBF2Q96F24 287 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 EAF1Q96JC9 268 aaPredicted RBP4.77□□□□□ -1.65
VRK3-220ENST00000600259 MBOAT4Q96T53 435 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 OSBPL10Q9BXB5 764 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 FAM107BQ9H098 131 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 ABCG5Q9H222 651 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 ZNF556Q9HAH1 456 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 EXOSC4Q9NPD3 245 aaKnown RBP4.77□□□□□ -1.65
VRK3-220ENST00000600259 MED4Q9NPJ6 270 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 PCDHB16Q9NRJ7 776 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 GSTK1Q9Y2Q3 226 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 ARL2BPQ9Y2Y0 163 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 SORL1Q92673 2214 aa4.77□□□□□ -1.65
VRK3-220ENST00000600259 TRAV24A0A0B4J272 114 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 TCRBV3S1A0A5B6 114 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 SEC14L6B5MCN3 397 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 I3L521 148 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 GNGT2O14610 69 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 IGKV1D-33P01593 117 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 IGKV1-33P01594 117 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 IGHG4P01861 327 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 ISG15P05161 165 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 KRT8P05787 483 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 ELANEP08246 267 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 OR2T7P0C7T2 308 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 TMEM11P17152 192 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 PRKACBP22694 351 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 NFYBP25208 207 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 PSMB8P28062 276 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 HTR1FP30939 366 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 VHLP40337 213 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 GPR12P47775 334 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 RAB7AP51149 207 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 MNAT1P51948 309 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 NANOS3P60323 173 aaKnown RBP4.76□□□□□ -1.65
VRK3-220ENST00000600259 ZP1P60852 638 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 SLC35B1P78383 322 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 PAX5Q02548 391 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 SCN1BQ07699 218 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 ZNF816Q0VGE8 651 aaPredicted RBP4.76□□□□□ -1.65
VRK3-220ENST00000600259 MADCAM1Q13477 382 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 GPR50Q13585 617 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 RBM39Q14498 530 aaKnown RBP4.76□□□□□ -1.65
VRK3-220ENST00000600259 FAM53AQ6NSI3 398 aaPredicted RBP4.76□□□□□ -1.65
VRK3-220ENST00000600259 SLC16A12Q6ZSM3 486 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 LHFPL2Q6ZUX7 228 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 TGIF2LXQ8IUE1 241 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 SAXO1Q8IYX7 474 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 CHST4Q8NCG5 386 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 Q8NFD4 153 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 OR5M8Q8NGP6 311 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 OR2G2Q8NGZ5 317 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 RFESDQ8TAC1 157 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 HAVCR2Q8TDQ0 301 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 DNAJC9Q8WXX5 260 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 TOMM40LQ969M1 308 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 RFT1Q96AA3 541 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 SPSB1Q96BD6 273 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 RBMXL1Q96E39 390 aaKnown RBP4.76□□□□□ -1.65
VRK3-220ENST00000600259 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 RCHY1Q96PM5 261 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 SPACA5Q96QH8 159 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 IL4I1Q96RQ9 567 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 TBX5Q99593 518 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 TEX12Q9BXU0 123 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 KLK15Q9H2R5 256 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 PLEKHA1Q9HB21 404 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 RHOFQ9HBH0 211 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 CALYQ9NYX4 217 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 IDI2-AS1Q9NZ38 188 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 OR6C3Q9NZP0 311 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 FRRS1LQ9P0K9 344 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 GLS2Q9UI32 602 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 KIF25Q9UIL4 384 aa4.76□□□□□ -1.65
VRK3-220ENST00000600259 ZNF256Q9Y2P7 627 aaPredicted RBP4.76□□□□□ -1.65
VRK3-220ENST00000600259 PLECQ15149 4684 aaKnown RBP4.75□□□□□ -1.65
VRK3-220ENST00000600259 IGHV3-72A0A0B4J1Y9 119 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 TRAV39A0A0B4J263 110 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 IGHV1-3A0A0C4DH29 117 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 A0A1W2PPE3 182 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 OR4C45A6NMZ5 311 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 ZNF736B4DX44 427 aaPredicted RBP4.75□□□□□ -1.65
VRK3-220ENST00000600259 J3QRE1 110 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 AP4M1O00189 453 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 DEGS1O15121 323 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 FKBP6O75344 327 aa4.75□□□□□ -1.65
VRK3-220ENST00000600259 DCTN3O75935 186 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms