RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	PECR	Q9BY49	303 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	GSX1	Q9H4S2	264 aa	Predicted RBP	18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	ZNF581	Q9P0T4	197 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	RABL2A	Q9UBK7	228 aa	Predicted RBP	18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	METRN	Q9UJH8	293 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	RABL2B	Q9UNT1	228 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026		A8MXK9	166 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026		B4DSR2	109 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	NDUFB3	O43676	98 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	SELL	P14151	372 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	HIST1H1D	P16402	221 aa	Known RBP	18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	GNB2	P62879	340 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	CDNF	Q49AH0	187 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	LRRC10	Q5BKY1	277 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	ZNF841	Q6ZN19	808 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	C6orf201	Q7Z4U5	140 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	DTX3	Q8N9I9	347 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	TMEM185A	Q8NFB2	350 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	SSBP3	Q9BWW4	388 aa	Predicted RBP	18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	FAM234A	Q9H0X4	552 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	MAB21L2	Q9Y586	359 aa		18.22	■□□□□ 0.51
LTBP4-227	ENST00000600026	ABCA1	O95477	2261 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	TMEM82	A0PJX8	343 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026		K7N7A8	449 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	HSPB6	O14558	160 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	PHF1	O43189	567 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	ZNF737	O75373	536 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	FOXH1	O75593	365 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	FCN3	O75636	299 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	TPPP	O94811	219 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	MSMB	P08118	114 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	GSTP1	P09211	210 aa	Known RBP	18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	HOXB4	P17483	251 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	ZFP36	P26651	326 aa	Known RBP	18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	MNDA	P41218	407 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	KCNJ3	P48549	501 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	TAS2R20	P59543	309 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	LCN2	P80188	198 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	PLAC9	Q5JTB6	97 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	SPANXN2	Q5MJ10	180 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	WDR25	Q64LD2	544 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	CLEC9A	Q6UXN8	241 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	IZUMO1	Q8IYV9	350 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	ZNRF1	Q8ND25	227 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	C15orf40	Q8WUR7	153 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	PPA2	Q9H2U2	334 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	CLN8	Q9UBY8	286 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	MRPS7	Q9Y2R9	242 aa	Known RBP	18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	MALRD1	Q5VYJ5	2156 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	ARHGAP32	A7KAX9	2087 aa		18.21	■□□□□ 0.51
LTBP4-227	ENST00000600026	ANK3	Q12955	4377 aa	Known RBP	18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	UBE2QL1	A1L167	161 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	FABP12	A6NFH5	140 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	PSPN	O60542	156 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	TGFA	P01135	160 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	TK1	P04183	234 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	GNB3	P16520	340 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	NPY4R	P50391	375 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	GRK1	Q15835	563 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	BRICD5	Q6PL45	260 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	C17orf107	Q6ZR85	190 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	CCDC190	Q86UF4	302 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	OR8H2	Q8N162	312 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	FGFRL1	Q8N441	504 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	BPIFB2	Q8N4F0	458 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	OR4S1	Q8NGB4	309 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	FAAP24	Q9BTP7	215 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	CHST6	Q9GZX3	395 aa		18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	SLC25A10	Q9UBX3	287 aa	Predicted RBP	18.2	■□□□□ 0.5
LTBP4-227	ENST00000600026	FUOM	A2VDF0	154 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	SERPINE3	A8MV23	424 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	MFNG	O00587	321 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	DVL1	O14640	695 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	MGST3	O14880	152 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	OR3A1	P47881	315 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	MRPS15	P82914	257 aa	Known RBP	18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	PITPNA	Q00169	270 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	IL18	Q14116	193 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	PNLIPRP3	Q17RR3	467 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	ZNF260	Q3ZCT1	412 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	FAM131A	Q6UXB0	335 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	GDPD3	Q7L5L3	318 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	GLCCI1	Q86VQ1	547 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	SULT4A1	Q9BR01	284 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	AUNIP	Q9H7T9	357 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	ZMAT3	Q9HA38	289 aa	Known RBP	18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	ETAA1	Q9NY74	926 aa		18.19	■□□□□ 0.5
LTBP4-227	ENST00000600026	CA11	O75493	328 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	CSN2	P05814	226 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	CD3G	P09693	182 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	NDUFB7	P17568	137 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	DVL1P1	P54792	670 aa	Predicted RBP	18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	MADCAM1	Q13477	382 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	ARFRP1	Q13795	201 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	ATXN7L3	Q14CW9	347 aa	Predicted RBP	18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	PYHIN1	Q6K0P9	492 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	S100Z	Q8WXG8	99 aa		18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms