RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	OR10AD1	Q8NGE0	317 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	OR2A12	Q8NGT7	310 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	OR2T4	Q8NH00	348 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	GNPDA2	Q8TDQ7	276 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	C11orf52	Q96A22	123 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	NABP1	Q96AH0	204 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	OR2A7	Q96R45	310 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	HSPB9	Q9BQS6	159 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	EBPL	Q9BY08	206 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	TBL1XR1	Q9BZK7	514 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	C20orf85	Q9H1P6	137 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	KLK15	Q9H2R5	256 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	ZDHHC11	Q9H8X9	412 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	GNB4	Q9HAV0	340 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	SIX2	Q9NPC8	291 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	RSL24D1	Q9UHA3	163 aa	Known RBP	4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	PCYOX1	Q9UHG3	505 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	GLS2	Q9UI32	602 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	GNG8	Q9UK08	70 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	BTRC	Q9Y297	605 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	MYH11	P35749	1972 aa		4.18	□□□□□ -1.74
PAF1-208	ENST00000598594	IGHV3OR16-12	A0A075B7B8	117 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594		A0A087WWV3	80 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594		A0A087WX48	190 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	OTOL1	A6NHN0	477 aa	Predicted RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594		H0Y9J4	135 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	COPE	O14579	308 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	NDUFS5	O43920	106 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	DHRS3	O75911	302 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	CDRT1	O95170	752 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	GADD45G	O95257	159 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	EPPIN	O95925	133 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	C1QB	P02746	253 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	VDAC1	P21796	283 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	PRSS3	P35030	304 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	BTC	P35070	178 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	VDAC2	P45880	294 aa	Predicted RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	NDUFA8	P51970	172 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	PIGP	P57054	158 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	KLF3	P57682	345 aa	Predicted RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	HNRNPA0	Q13151	305 aa	Known RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	BATF	Q16520	125 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	GSG1	Q2KHT4	349 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	IAH1	Q2TAA2	248 aa	Predicted RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	CNPY1	Q3B7I2	92 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	ATP6AP1L	Q52LC2	224 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	TSPO2	Q5TGU0	170 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	ZFAND6	Q6FIF0	208 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	ZNF550	Q7Z398	422 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	C1QL2	Q7Z5L3	287 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	C9orf40	Q8IXQ3	194 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	SLC22A18AS	Q8N1D0	253 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	GPR26	Q8NDV2	337 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	OR10J6P	Q8NGY7	276 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	FAM3D	Q96BQ1	224 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	CNRIP1	Q96F85	164 aa	Predicted RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	REEP6	Q96HR9	211 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	ST6GAL2	Q96JF0	529 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	BMF	Q96LC9	184 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	CCDC115	Q96NT0	180 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	ZNF382	Q96SR6	550 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	HIST1H4G	Q99525	98 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	SERPINI1	Q99574	410 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	PBDC1	Q9BVG4	233 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	SH3BGRL3	Q9H299	93 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	POMK	Q9H5K3	350 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	ADARB2	Q9NS39	739 aa	Known RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	HSPB8	Q9UJY1	196 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	OVOS2	A0A0J9YW53	1432 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	NPHP4	O75161	1426 aa	Predicted RBP	4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	FAM135B	Q49AJ0	1406 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	OVOS2	Q6IE36	1432 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	HECW2	Q9P2P5	1572 aa		4.17	□□□□□ -1.74
PAF1-208	ENST00000598594	PHLPP1	O60346	1717 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	PTPRK	Q15262	1439 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	FGD6	Q6ZV73	1430 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	VPS8	Q8N3P4	1428 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594		A0A1B0GV50	99 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	SMIM35	A0A1B0GVV1	85 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	TRAPPC13	A5PLN9	417 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	FAM183A	A6NL82	134 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	ZNF850	A8MQ14	1090 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594		H3BP45	60 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594		K7EQD1	137 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	MYL12B	O14950	172 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	RGS5	O15539	181 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	PDCD6	O75340	191 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	BANF1	O75531	89 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	ZFAND5	O76080	213 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	APOA2	P02652	100 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	CELA2A	P08217	269 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	UBB	P0CG47	229 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	ERG	P11308	486 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	CDK2	P24941	298 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	RPL35	P42766	123 aa	Known RBP	4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	VEGFC	P49767	419 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	AKR1D1	P51857	326 aa		4.16	□□□□□ -1.74
PAF1-208	ENST00000598594	EMP1	P54849	157 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms