RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TMEM138Q9NPI0 162 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 CKLFQ9UBR5 152 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 TBL2Q9Y4P3 447 aaKnown RBP12.23□□□□□ -0.45
TGFB1-202ENST00000597453 KIAA2026Q5HYC2 2103 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 A0A0G2JK05 382 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 A6NDX4 124 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 G3V4G9 280 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 GABRPO00591 440 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 RBP4P02753 201 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 JUNBP17275 347 aaPredicted RBP12.22□□□□□ -0.45
TGFB1-202ENST00000597453 MAPK3P27361 379 aaPredicted RBP12.22□□□□□ -0.45
TGFB1-202ENST00000597453 GABARAPL2P60520 117 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 GPR50Q13585 617 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 EDDM3AQ14507 147 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 TBCEQ15813 527 aaPredicted RBP12.22□□□□□ -0.45
TGFB1-202ENST00000597453 SPIN3Q5JUX0 258 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 TMEM219Q86XT9 240 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 LYG1Q8N1E2 194 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 MS4A15Q8N5U1 240 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 PXT1Q8NFP0 134 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 OR11H6Q8NGC7 330 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 OR52N4Q8NGI2 321 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 SNX22Q96L94 193 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 ZNF714Q96N38 554 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 TSC22D3Q99576 134 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 HMG20AQ9NP66 347 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 ISYNA1Q9NPH2 558 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 SERTAD4Q9NUC0 356 aa12.22□□□□□ -0.45
TGFB1-202ENST00000597453 TRAV8-7A0A075B6U6 113 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 MRPS14O60783 128 aaKnown RBP12.21□□□□□ -0.45
TGFB1-202ENST00000597453 TNFAIP8O95379 198 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 HAND1O96004 215 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 TMEM225BP0DP42 221 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 CALCBP10092 127 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 PRKACAP17612 351 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 DUSP1P28562 367 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 BDKRB2P30411 391 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 MLLT11Q13015 90 aaPredicted RBP12.21□□□□□ -0.45
TGFB1-202ENST00000597453 ZNF146Q15072 292 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 DDI2Q5TDH0 399 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 Q8N2B8 174 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 UFD1Q92890 307 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 FOXRED1Q96CU9 486 aaPredicted RBP12.21□□□□□ -0.45
TGFB1-202ENST00000597453 ORAI1Q96D31 301 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 MALSU1Q96EH3 234 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 GPER1Q99527 375 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 MRPS26Q9BYN8 205 aaKnown RBP12.21□□□□□ -0.45
TGFB1-202ENST00000597453 CHST6Q9GZX3 395 aa12.21□□□□□ -0.45
TGFB1-202ENST00000597453 hADV38S2A0JD32 116 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 PSPNO60542 156 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 OPN1MWP04001 364 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 GABRR1P24046 479 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 ZNF93P35789 620 aaPredicted RBP12.2□□□□□ -0.46
TGFB1-202ENST00000597453 MTNR1BP49286 362 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 SNU13P55769 128 aaKnown RBP12.2□□□□□ -0.46
TGFB1-202ENST00000597453 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
TGFB1-202ENST00000597453 DYNC1I2Q13409 638 aaKnown RBP12.2□□□□□ -0.46
TGFB1-202ENST00000597453 TPBGQ13641 420 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 GRK1Q15835 563 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 BEAN1Q3B7T3 259 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 SATL1Q86VE3 508 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 OR4S1Q8NGB4 309 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 TNFAIP8L1Q8WVP5 186 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 TMED9Q9BVK6 235 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 ABCB10Q9NRK6 738 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 GLS2Q9UI32 602 aa12.2□□□□□ -0.46
TGFB1-202ENST00000597453 PIN1P1O15428 100 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 SC5DO75845 299 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 MMP23AO75900 390 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 HSMCR30P0CW71 290 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 SMIM18P0DKX4 95 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 CD28P10747 220 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 PTGFRP43088 359 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 MAP2K4P45985 399 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 RPL5P46777 297 aaKnown RBP12.19□□□□□ -0.46
TGFB1-202ENST00000597453 OR3A4PP47883 348 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 ACSM3Q53FZ2 586 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 SAMD5Q5TGI4 173 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 LIPKQ5VXJ0 399 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 FOXB2Q5VYV0 432 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 ELP2Q6IA86 826 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 ASCL4Q6XD76 172 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 Q6ZS46 218 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 ZNF367Q7RTV3 350 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 MGLLQ99685 303 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
TGFB1-202ENST00000597453 EXOSC4Q9NPD3 245 aaKnown RBP12.19□□□□□ -0.46
TGFB1-202ENST00000597453 ACOT13Q9NPJ3 140 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 HILPDAQ9Y5L2 63 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 LINC00312Q9Y6C7 94 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 SESN1Q9Y6P5 492 aa12.19□□□□□ -0.46
TGFB1-202ENST00000597453 IGHV2-26A0A0B4J1V2 119 aa12.18□□□□□ -0.46
TGFB1-202ENST00000597453 A0A1W2PPK0 400 aa12.18□□□□□ -0.46
TGFB1-202ENST00000597453 SH2D1BO14796 132 aa12.18□□□□□ -0.46
TGFB1-202ENST00000597453 FBXO24O75426 580 aa12.18□□□□□ -0.46
TGFB1-202ENST00000597453 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
TGFB1-202ENST00000597453 CPEP16870 476 aa12.18□□□□□ -0.46
TGFB1-202ENST00000597453 OR3A1P47881 315 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms