RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 WIPF2Q8TF74 440 aaPredicted RBP10.48□□□□□ -0.73
LIG1-212ENST00000596549 GGHQ92820 318 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 GPER1Q99527 375 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 CDCA4Q9BXL8 241 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 C8orf4Q9NR00 106 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 A0A1W2PP11 408 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 FUOMA2VDF0 154 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 ZNF729A6NN14 1252 aaPredicted RBP10.47□□□□□ -0.73
LIG1-212ENST00000596549 FAM90A22PA8MWA6 464 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 F2RL2O00254 374 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 CASQ2O14958 399 aaPredicted RBP10.47□□□□□ -0.73
LIG1-212ENST00000596549 DEGS1O15121 323 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 XPNPEP2O43895 674 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 CDRT1O95170 752 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 ALDOBP05062 364 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 CD2P06729 351 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 VSIG10L2P0DP72 767 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 MYL12AP19105 171 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 HTR1DP28221 377 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 GLP1RP43220 463 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 BDH1Q02338 343 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 HLA-DRB5Q30154 266 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 PAN3Q58A45 887 aaKnown RBP10.47□□□□□ -0.73
LIG1-212ENST00000596549 OR52W1Q6IF63 320 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 Q6ZTK2 550 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 SATL1Q86VE3 508 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 DHRSXQ8N5I4 330 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 FBLIM1Q8WUP2 373 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 CPNE2Q96FN4 548 aaPredicted RBP10.47□□□□□ -0.73
LIG1-212ENST00000596549 TMEM80Q96HE8 168 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 KIRREL1Q96J84 757 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 NR1H4Q96RI1 486 aaPredicted RBP10.47□□□□□ -0.73
LIG1-212ENST00000596549 BABAM2Q9NXR7 383 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 IL36GQ9NZH8 169 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 KIF25Q9UIL4 384 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 PITPNC1Q9UKF7 332 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 ZNF281Q9Y2X9 895 aa10.47□□□□□ -0.73
LIG1-212ENST00000596549 PLXNB1O43157 2135 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 TRAV8-7A0A075B6U6 113 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 MAGEB3O15480 346 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 CSF1P09603 554 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 FSTP19883 344 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 CD24P25063 80 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 CAPGP40121 348 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 RBM11P57052 281 aaKnown RBP10.46□□□□□ -0.73
LIG1-212ENST00000596549 BLCAPP62952 87 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 PAX5Q02548 391 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 NHLRC3Q5JS37 347 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 RTN4RL2Q86UN3 420 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 FAM110DQ8TAY7 271 aaPredicted RBP10.46□□□□□ -0.73
LIG1-212ENST00000596549 ZNF596Q8TC21 504 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 GHSRQ92847 366 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 WNT10AQ9GZT5 417 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 TMEM138Q9NPI0 162 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 CALYQ9NYX4 217 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 OR6C3Q9NZP0 311 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 DPM3Q9P2X0 92 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 HSPE1-MOB4S4R3N1 261 aa10.46□□□□□ -0.73
LIG1-212ENST00000596549 MEIKINA0A087WXM9 373 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 TRBV5-7A0A0A0MS05 114 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 KBTBD11-OT1A0A1B0GTJ5 212 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 PNMA8CA0A1B0GUJ8 204 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 LY6LH3BQJ8 138 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 BUB1B-PAK6H3BSN5 160 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 HTR3BO95264 441 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 SERPINA2P20848 420 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 BDKRB2P30411 391 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 SSTR5P35346 364 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 ZNF93P35789 620 aaPredicted RBP10.45□□□□□ -0.74
LIG1-212ENST00000596549 PPP3R1P63098 170 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 ST3GAL4Q11206 333 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 RIPK1Q13546 671 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 RSU1Q15404 277 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 Q499Y3 187 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
LIG1-212ENST00000596549 YIF1BQ5BJH7 314 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 TPTE2P1Q5T6R2 138 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 AHSA2Q719I0 299 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 C8orf59Q8N0T1 100 aaPredicted RBP10.45□□□□□ -0.74
LIG1-212ENST00000596549 LYG1Q8N1E2 194 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 OR4D6Q8NGJ1 314 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 MRGPRDQ8TDS7 321 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 LEAP2Q969E1 77 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 CYYR1Q96J86 154 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 OR14A2Q96R54 314 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 ZNF184Q99676 751 aaPredicted RBP10.45□□□□□ -0.74
LIG1-212ENST00000596549 CNOT2Q9NZN8 540 aaKnown RBP10.45□□□□□ -0.74
LIG1-212ENST00000596549 PSORS1C1Q9UIG5 152 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 ST3GAL6Q9Y274 331 aa10.45□□□□□ -0.74
LIG1-212ENST00000596549 TRAV39A0A0B4J263 110 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 ADARB2-AS1A8MUL3 147 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 NPIPB11E5RHQ5 1161 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 GEMIN2O14893 280 aaKnown RBP10.44□□□□□ -0.74
LIG1-212ENST00000596549 FBXO24O75426 580 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 GPX5O75715 221 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 IL1AP01583 271 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 IGHV3-7P01780 117 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 CD28P10747 220 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 C21orf33P30042 268 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms