RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 LIAT1Q6ZQX7 453 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 RTN4RL2Q86UN3 420 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 OR10K1Q8NGX5 313 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 THRSPQ92748 146 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 MYDGFQ969H8 173 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 DERL3Q96Q80 235 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 OR14A2Q96R54 314 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 ZNF184Q99676 751 aaPredicted RBP10.55□□□□□ -0.72
USE1-207ENST00000596136 CLEC7AQ9BXN2 247 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 ANKRD60Q9BZ19 345 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 DUSP21Q9H596 190 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 RAB18Q9NP72 206 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 PAK1IP1Q9NWT1 392 aaPredicted RBP10.55□□□□□ -0.72
USE1-207ENST00000596136 OR6C3Q9NZP0 311 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 CKLFQ9UBR5 152 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 FBLN5Q9UBX5 448 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 WNK1Q9H4A3 2382 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 VWFP04275 2813 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 MAGEA13PA6NCF6 341 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 ZNF729A6NN14 1252 aaPredicted RBP10.54□□□□□ -0.72
USE1-207ENST00000596136 HTR3BO95264 441 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 IGLV1-47P01700 117 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 CDK2P24941 298 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 KIR2DS4P43632 304 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 RBM11P57052 281 aaKnown RBP10.54□□□□□ -0.72
USE1-207ENST00000596136 KRTAP10-3P60369 221 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 ATXN7L3Q14CW9 347 aaPredicted RBP10.54□□□□□ -0.72
USE1-207ENST00000596136 C17orf58Q2M2W7 97 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 PIGYQ3MUY2 71 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 PAN3Q58A45 887 aaKnown RBP10.54□□□□□ -0.72
USE1-207ENST00000596136 RSBN1Q5VWQ0 802 aaPredicted RBP10.54□□□□□ -0.72
USE1-207ENST00000596136 SLC35E4Q6ICL7 350 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 UNQ9370/PRO34162Q6UXP9 181 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 TRAPPC6BQ86SZ2 158 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 LINC00596Q86U02 117 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 OSR2Q8N2R0 312 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 MS4A15Q8N5U1 240 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 OR4P4Q8NGL7 312 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 NR1H4Q96RI1 486 aaPredicted RBP10.54□□□□□ -0.72
USE1-207ENST00000596136 NKX3-1Q99801 234 aaPredicted RBP10.54□□□□□ -0.72
USE1-207ENST00000596136 MND1Q9BWT6 205 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 BARHL1Q9BZE3 327 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 FAM192AQ9GZU8 254 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 PPIL3Q9H2H8 161 aaKnown RBP10.54□□□□□ -0.72
USE1-207ENST00000596136 PCDHB16Q9NRJ7 776 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 SCN3BQ9NY72 215 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 ING4Q9UNL4 249 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 ST3GAL6Q9Y274 331 aa10.54□□□□□ -0.72
USE1-207ENST00000596136 KBTBD11-OT1A0A1B0GTJ5 212 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 PNMA8CA0A1B0GUJ8 204 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 FAM90A22PA8MWA6 464 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 PTGES3LE9PB15 166 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 H0YHG0 523 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 GDNFP39905 211 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 SRSF4Q08170 494 aaKnown RBP10.53□□□□□ -0.72
USE1-207ENST00000596136 DYNC1I2Q13409 638 aaKnown RBP10.53□□□□□ -0.72
USE1-207ENST00000596136 GPR50Q13585 617 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 GPR176Q14439 515 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 SPHARQ15513 63 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 SSX2Q16385 188 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 LY6EQ16553 131 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 MPV17LQ2QL34 196 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 PRAMEF5Q5TYX0 476 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 BAIAP2L2Q6UXY1 529 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 ABHD12Q8N2K0 398 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 ZNF565Q8N9K5 539 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 SGCDQ92629 289 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 MRPS24Q96EL2 167 aaKnown RBP10.53□□□□□ -0.72
USE1-207ENST00000596136 OR5M11Q96RB7 305 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 RANBP3Q9H6Z4 567 aaPredicted RBP10.53□□□□□ -0.72
USE1-207ENST00000596136 KIF25Q9UIL4 384 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 TCF19Q9Y242 345 aa10.53□□□□□ -0.72
USE1-207ENST00000596136 A0A1W2PPK0 400 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 A6NDX4 124 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 NPIPB11E5RHQ5 1161 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 GEMIN2O14893 280 aaKnown RBP10.52□□□□□ -0.73
USE1-207ENST00000596136 CHST1O43916 411 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 SC5DO75845 299 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 CSTBP04080 98 aaKnown RBP10.52□□□□□ -0.73
USE1-207ENST00000596136 CD37P11049 281 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 GTF2F2P13984 249 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 MAPK3P27361 379 aaPredicted RBP10.52□□□□□ -0.73
USE1-207ENST00000596136 HTR1DP28221 377 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 GP2P55259 537 aaKnown RBP10.52□□□□□ -0.73
USE1-207ENST00000596136 FAM189A2Q15884 450 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 CCBE1Q6UXH8 406 aaPredicted RBP10.52□□□□□ -0.73
USE1-207ENST00000596136 DTX3Q8N9I9 347 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 SUMF2Q8NBJ7 301 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 OR4D6Q8NGJ1 314 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 PLPPR1Q8TBJ4 325 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 ZNF596Q8TC21 504 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 S100A13Q99584 98 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 DPCDQ9BVM2 203 aaPredicted RBP10.52□□□□□ -0.73
USE1-207ENST00000596136 VCX3BQ9H321 246 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 ZNF581Q9P0T4 197 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 DPM3Q9P2X0 92 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 TPRKBQ9Y3C4 175 aa10.52□□□□□ -0.73
USE1-207ENST00000596136 MEIKINA0A087WXM9 373 aa10.51□□□□□ -0.73
USE1-207ENST00000596136 A0A1W2PP11 408 aa10.51□□□□□ -0.73
USE1-207ENST00000596136 LY6LH3BQJ8 138 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms