RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 C12orf4Q9NQ89 552 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 IFT46Q9NQC8 304 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 ETAA1Q9NY74 926 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 EDARQ9UNE0 448 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 MAB21L2Q9Y586 359 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 HSPB6O14558 160 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 SIGLEC5O15389 551 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 PTTG1O95997 202 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 GYPAP02724 150 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 CSN2P05814 226 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 AKAIN1P0CW23 69 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 DAOP14920 347 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 BTCP35070 178 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 RFX2P48378 723 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 EFNA4P52798 201 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 TAS2R19P59542 299 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 OXA1LQ15070 435 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 ZMYND11Q15326 602 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 RSBN1Q5VWQ0 802 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 GDPD3Q7L5L3 318 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF561Q8N587 486 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 NEK7Q8TDX7 302 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 CHPT1Q8WUD6 406 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 COQ2Q96H96 371 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 COX4I2Q96KJ9 171 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF665Q9H7R5 613 aa12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF230Q9UIE0 474 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-211ENST00000595945 CELSR2Q9HCU4 2923 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 IGKV1D-8A0A087WSZ0 117 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 NAP1L6A6NFF2 107 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF736B4DX44 427 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 K7N7A8 449 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 NDUFS7O75251 213 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 LY6HO94772 140 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 IGHV2-70P01814 119 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 MT-ND4P03905 459 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 CD3DP04234 171 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 FCER2P06734 321 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 TBPP20226 339 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 GABRA2P47869 451 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 BTG1P62324 171 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 MRPS15P82914 257 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 SLC35E4Q6ICL7 350 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 OR52W1Q6IF63 320 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 STEAP1BQ6NZ63 245 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 BEST4Q8NFU0 473 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 OR4C16Q8NGL9 310 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 CCL13Q99616 98 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 FAM234AQ9H0X4 552 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 Q9N2K0 584 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 KAAG1Q9UBP8 84 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 NAV2Q8IVL1 2488 aa12.29□□□□□ -0.44
SHKBP1-211ENST00000595945 APCP25054 2843 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 A0A1B0GW55 424 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 H7C1Q1 480 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 MGST3O14880 152 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 SSX4O60224 188 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF735P0CB33 412 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 DUX4L2P0CJ85 424 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 DUX4L3P0CJ86 424 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 DUX4L4P0CJ87 422 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 DUX4L5P0CJ88 424 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 DUX4L6P0CJ89 424 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 DUX4L7P0CJ90 424 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 SPNP16150 400 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 HLA-DMAP28067 261 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 ATXN7L3Q14CW9 347 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 ACTBL2Q562R1 376 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 MZT2BQ6NZ67 158 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 DUX4L9Q6RFH8 374 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 MOB1BQ7L9L4 216 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 NRARPQ7Z6K4 114 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 ASCC1Q8N9N2 400 aaKnown RBP12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 MINDY2Q8NBR6 621 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 OR4D10Q8NGI6 311 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 PPP1R35Q8TAP8 253 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 MAFIPQ8WZ33 124 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 CCL19Q99731 98 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 TMEM246Q9BRR3 403 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 ST6GALNAC5Q9BVH7 336 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 TINAGL1Q9GZM7 467 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 NCOR1P1Q9H4R4 102 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 CHODLQ9H9P2 273 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 CHMP1AQ9HD42 196 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 MYOZ1Q9NP98 299 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF701Q9NV72 531 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 DUX4Q9UBX2 424 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 FBN2P35556 2912 aa12.28□□□□□ -0.44
SHKBP1-211ENST00000595945 TMEM30CPA0ZSE6 113 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 NKX6-3A6NJ46 265 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 NDUFA2O43678 99 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 FCN3O75636 299 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 RAB3DO95716 219 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 IGHV4-39P01824 125 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 TK1P04183 234 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 SELLP14151 372 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 PAX1P15863 534 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 SLC6A1P30531 599 aa12.27□□□□□ -0.45
SHKBP1-211ENST00000595945 SSTR2P30874 369 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms