RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ETAA1Q9NY74 926 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 LPAR3Q9UBY5 353 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
VMP1-210ENST00000589823 HSF4Q9ULV5 492 aa11.28□□□□□ -0.6
VMP1-210ENST00000589823 A0A0A6YYH2 397 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 PPIAL4CA0A0B4J2A2 164 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 IGHV2-70DA0A0C4DH43 119 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 A0A1W2PPH5 198 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 A6NJ64 397 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 FAM25AB3EWG3 89 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 FAM25CB3EWG5 89 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 FAM25GB3EWG6 89 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 C22orf46C9J442 243 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 RGS5O15539 181 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 PPIAL4GP0DN37 164 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 ZNF16P17020 682 aaPredicted RBP11.27□□□□□ -0.61
VMP1-210ENST00000589823 P2RX3P56373 397 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 MEF2CQ06413 473 aaPredicted RBP11.27□□□□□ -0.61
VMP1-210ENST00000589823 ARL6IP1Q15041 203 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 MOGAT2Q3SYC2 334 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 BTNL3Q6UXE8 466 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 BIVMQ86UB2 503 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 CMTM4Q8IZR5 234 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 FAM185AQ8N0U4 392 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 MCFD2Q8NI22 146 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 TMEM186Q96B77 213 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 ARHGAP5-AS1Q96IT6 56 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 FAAP24Q9BTP7 215 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 PECRQ9BY49 303 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 SLIRPQ9GZT3 109 aaKnown RBP11.27□□□□□ -0.61
VMP1-210ENST00000589823 C6orf62Q9GZU0 229 aaPredicted RBP11.27□□□□□ -0.61
VMP1-210ENST00000589823 ADAM30Q9UKF2 790 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 ZNF469Q96JG9 3925 aaPredicted RBP11.27□□□□□ -0.61
VMP1-210ENST00000589823 CREBBPQ92793 2442 aa11.27□□□□□ -0.61
VMP1-210ENST00000589823 CR1P17927 2039 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 A0A075B6Q4 140 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 TMEM30CPA0ZSE6 113 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 FOXI3A8MTJ6 420 aaPredicted RBP11.26□□□□□ -0.61
VMP1-210ENST00000589823 RAB27BO00194 218 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 HPGDSO60760 199 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 CA11O75493 328 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 APOA1P02647 267 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 LIPFP07098 398 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 HIST1H1DP16402 221 aaKnown RBP11.26□□□□□ -0.61
VMP1-210ENST00000589823 GATA3P23771 443 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 GLIPR1P48060 266 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 DVL1P1P54792 670 aaPredicted RBP11.26□□□□□ -0.61
VMP1-210ENST00000589823 TMEM50BP56557 158 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 MRPS15P82914 257 aaKnown RBP11.26□□□□□ -0.61
VMP1-210ENST00000589823 DCAF12L2Q5VW00 463 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 RSBN1Q5VWQ0 802 aaPredicted RBP11.26□□□□□ -0.61
VMP1-210ENST00000589823 SLC35E4Q6ICL7 350 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 TPRX1Q8N7U7 411 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 LY6G5BQ8NDX9 201 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 C8orf46Q8TAG6 207 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 PLPPR1Q8TBJ4 325 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 COQ2Q96H96 371 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 SULT4A1Q9BR01 284 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 C19orf12Q9NSK7 152 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 HIF1ANQ9NWT6 349 aa11.26□□□□□ -0.61
VMP1-210ENST00000589823 MEIKINA0A087WXM9 373 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 TRGV10A0A0A0MS01 117 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 A0A0G2JMP0 313 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 A0A0X1KG70 313 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 KIR2DS1A0A191URI9 304 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 ODAMA1E959 279 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 CD5LO43866 347 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 EIF4EP06730 217 aaKnown RBP11.25□□□□□ -0.61
VMP1-210ENST00000589823 GNB3P16520 340 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 CDK2P24941 298 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 PAX5Q02548 391 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 CDNFQ49AH0 187 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 PLAC9Q5JTB6 97 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 ZNF497Q6ZNH5 498 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 TRAPPC6BQ86SZ2 158 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 OR4M2Q8NGB6 313 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 DMRTB1Q96MA1 342 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 NCOR1P1Q9H4R4 102 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 CHMP1AQ9HD42 196 aaPredicted RBP11.25□□□□□ -0.61
VMP1-210ENST00000589823 MMP26Q9NRE1 261 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 OR6C3Q9NZP0 311 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 AK3Q9UIJ7 227 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 KIF25Q9UIL4 384 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 TRAPPC2LQ9UL33 140 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 MALRD1Q5VYJ5 2156 aa11.25□□□□□ -0.61
VMP1-210ENST00000589823 FLNAP21333 2647 aaKnown RBP11.24□□□□□ -0.61
VMP1-210ENST00000589823 TRAV18A0A075B6X5 111 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 SERPINE3A8MV23 424 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 MFNGO00587 321 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 CTDSP2O14595 271 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 XRCC3O43542 346 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 GSTP1P09211 210 aaKnown RBP11.24□□□□□ -0.61
VMP1-210ENST00000589823 CD3GP09693 182 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 ELK1P19419 428 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 TALDO1P37837 337 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 MNDAP41218 407 aa11.24□□□□□ -0.61
VMP1-210ENST00000589823 GLP1RP43220 463 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms