RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	BIN3	Q9NQY0	253 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	P4HTM	Q9NXG6	502 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	LRFN1	Q9P244	771 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	AMDHD2	Q9Y303	409 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MYO9A	B2RTY4	2548 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TEX15	Q9BXT5	2789 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	C3orf85	A0A1B0GTC6	90 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516		A0A1B0GW64	132 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PQLC2L	A1A4F0	135 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	BTBD17	A6NE02	478 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TRAPPC2L	H3BP13	241 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GPR31	O00270	319 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MPPED1	O15442	326 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PHF1	O43189	567 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR7C1	O76099	320 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PPY	P01298	95 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MBP	P02686	304 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	DANCR	P0C864	163 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	NME2	P22392	152 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ANOS1	P23352	680 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	FXYD4	P59646	89 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	FGF12	P61328	243 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GUCA2B	Q16661	112 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516		Q6ZRG5	221 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	CMTM1	Q8IZ96	169 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF611	Q8N823	705 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	NANOS1	Q8WY41	292 aa	Known RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	KIRREL1	Q96J84	757 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TMEM56	Q96MV1	263 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	HDHD3	Q9BSH5	251 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PRRG4	Q9BZD6	226 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	UNKL	Q9H9P5	680 aa	Known RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PRR13	Q9NZ81	148 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MPC1	Q9Y5U8	109 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TMEM56-RWDD3	S4R434	201 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR5B21	A6NL26	309 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TRDC	B7Z8K6	153 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516		J3QW42	95 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516		K7ENP7	123 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	KCNAB3	O43448	404 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	NDUFA2	O43678	99 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SFTA3	P0C7M3	94 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	JMJD7	P0C870	316 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SPP1	P10451	314 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	RFC3	P40938	356 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	LPAR6	P43657	344 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	CAMLG	P49069	296 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	RRAD	P55042	308 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	UCP2	P55851	309 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	RAB2A	P61019	212 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	VAMP2	P63027	116 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ARF1	P84077	181 aa	Known RBP	12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PIGY	Q3MUY2	71 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	AVPI1	Q5T686	147 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	INO80C	Q6PI98	192 aa	Predicted RBP	12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SLC25A26	Q70HW3	274 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF695	Q8IW36	515 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MCEMP1	Q8IX19	187 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	C15orf54	Q8N8G6	183 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	BOLL	Q8N9W6	283 aa	Known RBP	12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	EXTL1	Q92935	676 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF775	Q96BV0	537 aa	Predicted RBP	12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MSI2	Q96DH6	328 aa	Known RBP	12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TMEM222	Q9H0R3	208 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TLNRD1	Q9H1K6	362 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF175	Q9Y473	711 aa		12.1	□□□□□ -0.47
NEDD4L-223	ENST00000588516	CREBBP	Q92793	2442 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TRBV6-6	A0A0A6YYG2	114 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	IGKV1-12	A0A0C4DH73	117 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ANKRD30BL	A7E2S9	258 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	IGKV1D-12	P01611	117 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MUC1	P15941	1255 aa	Predicted RBP	12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	AADAC	P22760	399 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	KCNJ3	P48549	501 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	HOXA1	P49639	335 aa	Predicted RBP	12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	HGFAC	Q04756	655 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	BAX	Q07812	192 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PRDX4	Q13162	271 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PHLDA2	Q53GA4	152 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR2A2	Q6IF42	318 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF573	Q86YE8	665 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR2M7	Q8NG81	312 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GLYATL2	Q8WU03	294 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	APH1A	Q96BI3	265 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	THOC3	Q96J01	351 aa	Known RBP	12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PAPOLG	Q9BWT3	736 aa	Known RBP	12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TUBA4B	Q9H853	241 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PLEKHF2	Q9H8W4	249 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GP6	Q9HCN6	339 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516		Q9N2K0	584 aa		12.09	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TEP1	Q99973	2627 aa	Known RBP	12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	MYO7B	Q6PIF6	2116 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516		A0A0G2JMM0	328 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516		A0A1W2PPB8	328 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516		A0A1W2PRS3	328 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	KIR3DP1	A8MWS1	328 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	PRH1	P02810	166 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	IFNA4	P05014	189 aa		12.08	□□□□□ -0.48

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