RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 DEGS1O15121 323 aa17.23■□□□□ 0.35
ATG4D-204ENST00000586417 CD3EP07766 207 aa17.23■□□□□ 0.35
ATG4D-204ENST00000586417 NPY4RP50391 375 aa17.23■□□□□ 0.35
ATG4D-204ENST00000586417 GMFBP60983 142 aa17.23■□□□□ 0.35
ATG4D-204ENST00000586417 HOXA4Q00056 320 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-204ENST00000586417 SRSF7Q16629 238 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATG4D-204ENST00000586417 SPIN3Q5JUX0 258 aa17.23■□□□□ 0.35
ATG4D-204ENST00000586417 RDH5Q92781 318 aa17.23■□□□□ 0.35
ATG4D-204ENST00000586417 ELMOD3Q96FG2 381 aa17.23■□□□□ 0.35
ATG4D-204ENST00000586417 ZNF222Q9UK12 451 aa17.23■□□□□ 0.35
ATG4D-204ENST00000586417 PLSCR5A0PG75 271 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 OR5H14A6NHG9 310 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 HS3ST1O14792 307 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 OR2H2O95918 312 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 ZNF44P15621 663 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 FPR2P25090 351 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 SPICQ8N5J4 248 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 ADAD2Q8NCV1 583 aaKnown RBP17.22■□□□□ 0.35
ATG4D-204ENST00000586417 WDR13Q9H1Z4 485 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 LIME1Q9H400 295 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 CHMP1AQ9HD42 196 aaPredicted RBP17.22■□□□□ 0.35
ATG4D-204ENST00000586417 Q9N2K0 584 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 NECAP2Q9NVZ3 263 aa17.22■□□□□ 0.35
ATG4D-204ENST00000586417 SLC33A1O00400 549 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-204ENST00000586417 OR5H8P0DN80 308 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 ANXA3P12429 323 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 ZBTB25P24278 435 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 DHRS2Q13268 280 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 SPRNQ5BIV9 151 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 LILRB1Q8NHL6 650 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-204ENST00000586417 NEK7Q8TDX7 302 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 C5orf66Q9H5L9 145 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 C1orf123Q9NWV4 160 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 RNF115Q9Y4L5 304 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 ATP23Q9Y6H3 246 aa17.21■□□□□ 0.35
ATG4D-204ENST00000586417 CHD3Q12873 2000 aaKnown RBP17.21■□□□□ 0.35
ATG4D-204ENST00000586417 TRBV6-6A0A0A6YYG2 114 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 SMLR1H3BR10 107 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 C1QBP02746 253 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 GSTT2P0CG29 244 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 SELENOVP59797 346 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 UBE2MP61081 183 aaKnown RBP17.2■□□□□ 0.34
ATG4D-204ENST00000586417 RBM39Q14498 530 aaKnown RBP17.2■□□□□ 0.34
ATG4D-204ENST00000586417 FAHD2BQ6P2I3 314 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-204ENST00000586417 ACP7Q6ZNF0 438 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 MRPL30Q8TCC3 161 aaKnown RBP17.2■□□□□ 0.34
ATG4D-204ENST00000586417 FAHD2AQ96GK7 314 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 MEGF10Q96KG7 1140 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 OR2V2Q96R30 315 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 MGAT4CQ9UBM8 478 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 SIRPB1O00241 398 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 COL8A1P27658 744 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 PPP1R1AQ13522 171 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 ADIPOQQ15848 244 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 SP5Q6BEB4 398 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-204ENST00000586417 DHRS11Q6UWP2 260 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 C20orf204Q6ZNR8 217 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 NOXA1Q86UR1 476 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 SPOCK3Q9BQ16 436 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 ZNF2Q9BSG1 426 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-204ENST00000586417 TMEM204Q9BSN7 226 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 ZNF436Q9C0F3 470 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-204ENST00000586417 RIMS4Q9H426 269 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-204ENST00000586417 DECR2Q9NUI1 292 aa17.2■□□□□ 0.34
ATG4D-204ENST00000586417 A0A1W2PPR1 153 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 E7EQL1 145 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 SH2D1BO14796 132 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 SPRY3O43610 288 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 HAND1O96004 215 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 RBMXP38159 391 aaKnown RBP17.19■□□□□ 0.34
ATG4D-204ENST00000586417 ZNF81P51508 661 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 SURF2Q15527 256 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-204ENST00000586417 C2orf68Q2NKX9 166 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 SHEQ5VZ18 495 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 ZNF880Q6PDB4 577 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 TMEM185AQ8NFB2 350 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 OR2AK2Q8NG84 335 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 TMEM230Q96A57 120 aa17.19■□□□□ 0.34
ATG4D-204ENST00000586417 RTBDNQ9BSG5 229 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-204ENST00000586417 TRAF4Q9BUZ4 470 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-204ENST00000586417 hCG_1807616A0A1W2PRN6 198 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 FABP7O15540 132 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 HLA-AP01891 365 aaKnown RBP17.18■□□□□ 0.34
ATG4D-204ENST00000586417 GLRA1P23415 457 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 CFHR2P36980 270 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 CEBPDP49716 269 aaPredicted RBP17.18■□□□□ 0.34
ATG4D-204ENST00000586417 GZMKP49863 264 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 BAMBIQ13145 260 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 PAN3Q58A45 887 aaKnown RBP17.18■□□□□ 0.34
ATG4D-204ENST00000586417 FIP1L1Q6UN15 594 aaKnown RBP17.18■□□□□ 0.34
ATG4D-204ENST00000586417 LYG2Q86SG7 212 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 GAPTQ8N292 157 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 OR10Z1Q8NGY1 313 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 PLPPR1Q8TBJ4 325 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 LRRC29Q8WV35 223 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 TMEM165Q9HC07 324 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 DLL4Q9NR61 685 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 TREM2Q9NZC2 230 aa17.18■□□□□ 0.34
ATG4D-204ENST00000586417 C9orf170A2RU37 121 aa17.17■□□□□ 0.34
ATG4D-204ENST00000586417 A6NNC1 897 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms