RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 FAM219AQ8IW50 185 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 STXBP6Q8NFX7 210 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 OR52L2PQ8NGH6 319 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 OR4P4Q8NGL7 312 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 VN1R17PQ8TDU5 208 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 CA5BP1Q8WTZ4 195 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 GNRHR2Q96P88 292 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 SF3B5Q9BWJ5 86 aaKnown RBP11.5□□□□□ -0.57
RNF43-208ENST00000584437 CXXC4Q9H2H0 198 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 NINQ8N4C6 2090 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 NKX2-6A6NCS4 301 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 MFSD2BA6NFX1 497 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 MUC1P15941 1255 aaPredicted RBP11.5□□□□□ -0.57
RNF43-208ENST00000584437 GGTLC2Q14390 218 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 SPINK9Q5DT21 86 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.5□□□□□ -0.57
RNF43-208ENST00000584437 MRGPRDQ8TDS7 321 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 TMEM204Q9BSN7 226 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 SARGQ9BW04 601 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 HIST1H1EP10412 219 aaKnown RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 BCL2P10415 239 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 BRS3P32247 399 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 IER3P46695 156 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 DHRS13Q6UX07 377 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 ZNF547Q8IVP9 402 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 GPBAR1Q8TDU6 330 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 LRRC29Q8WV35 223 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 RNF133Q8WVZ7 376 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 PERPQ96FX8 193 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 GRAMD2BQ96HH9 432 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 DOK5Q9P104 306 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 SRSF10O75494 262 aaKnown RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 MMP9P14780 707 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 SRP14P37108 136 aaKnown RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 IL11RAQ14626 422 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 GUCA2BQ16661 112 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 FAM209BQ5JX69 171 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 WDFY1Q8IWB7 410 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 PUSL1Q8N0Z8 303 aaKnown RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 ZNF738Q8NE65 137 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 OR1L3Q8NH93 324 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 VSTM2LQ96N03 204 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 TCF21O43680 179 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 MELTFP08582 738 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 RPS4XP62701 263 aaKnown RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 OR10D3Q8NH80 312 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 ZFP64Q9NPA5 681 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 IFITM10A6NMD0 228 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 MT-ND6P03923 174 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 ORM2P19652 201 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 CCL7P80098 99 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 ZNF660Q6AZW8 331 aaPredicted RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 SCGB1D4Q6XE38 83 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 SPEM1Q8N4L4 309 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 GMPPAQ96IJ6 420 aaPredicted RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 GPX7Q96SL4 187 aaPredicted RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 AMMECR1Q9Y4X0 333 aaPredicted RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 ZNF716A6NP11 495 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 F5H697 171 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 RAC3P60763 192 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 TP53RKQ96S44 253 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 CCL28Q9NRJ3 127 aa11.49□□□□□ -0.57
RNF43-208ENST00000584437 MYH14Q7Z406 1995 aaKnown RBP11.49□□□□□ -0.57
RNF43-208ENST00000584437 LIPT2A6NK58 231 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 GABRG2P18507 467 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 COL8A1P27658 744 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 PRRX1P54821 245 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 VAX1Q5SQQ9 334 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 LINC00596Q86U02 117 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 RGP1Q92546 391 aaPredicted RBP11.48□□□□□ -0.57
RNF43-208ENST00000584437 OR2V2Q96R30 315 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 OR2W1Q9Y3N9 320 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 IGHV3-43A0A0B4J1X8 118 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 IGHV3-43DP0DP04 118 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 MRPS11P82912 194 aaKnown RBP11.48□□□□□ -0.57
RNF43-208ENST00000584437 ALKBH6Q3KRA9 238 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 C16orf82Q7Z2V1 217 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 ADAMTS17Q8TE56 1095 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 SH2D7A6NKC9 451 aaPredicted RBP11.48□□□□□ -0.57
RNF43-208ENST00000584437 CISD3P0C7P0 127 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 VSIG10L2P0DP72 767 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 PSG6Q00889 435 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 VASH2Q86V25 355 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 ACTL6AO96019 429 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 TMEM50BP56557 158 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 OR4A4PQ8NGN8 299 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 IER2Q9BTL4 223 aa11.48□□□□□ -0.57
RNF43-208ENST00000584437 IGHV5-51A0A0C4DH38 117 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 HSPB1P04792 205 aaKnown RBP11.47□□□□□ -0.57
RNF43-208ENST00000584437 LYZP61626 148 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 C10orf111Q8N326 155 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 PRNDQ9UKY0 176 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 MS4A18H0YCH9 400 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 MS4A18Q3C1V0 323 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
RNF43-208ENST00000584437 SLC25A33Q9BSK2 321 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms