RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 DPF1Q92782 380 aa6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 EMG1Q92979 244 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 AKR1E2Q96JD6 320 aa6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 CNN2Q99439 309 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 ZNF649Q9BS31 505 aa6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 ZNF556Q9HAH1 456 aa6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 PLEKHA1Q9HB21 404 aa6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 PCDHB16Q9NRJ7 776 aa6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 DNAJB9Q9UBS3 223 aa6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 MRM2Q9UI43 246 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 TMEM14AQ9Y6G1 99 aa6.19□□□□□ -1.42
SMCHD1-210ENST00000583800 FAM90A7PA6NKC0 464 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 DHRS7CA6NNS2 312 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 FAM90A12PA8MX19 464 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 FAM90A23PA8MXZ1 464 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 PRKYO43930 277 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 DCTN3O75935 186 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 OR2F2O95006 317 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 RPP14O95059 124 aaKnown RBP6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 CCL1P22362 96 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 DUSP1P28562 367 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 BRS3P32247 399 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 RAP2BP61225 183 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 ZBTB49Q6ZSB9 765 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 Q6ZSR3 168 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 SSX6Q7RTT6 188 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 EGFL6Q8IUX8 553 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 ARHGAP24Q8N264 748 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 ABHD12Q8N2K0 398 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 OSR2Q8N2R0 312 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 CANT1Q8WVQ1 401 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 STMN2Q93045 179 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 ASB9Q96DX5 294 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 RBM14Q96PK6 669 aaKnown RBP6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 TBX5Q99593 518 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 TEX12Q9BXU0 123 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 ADGRL4Q9HBW9 690 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 RBFOX1Q9NWB1 397 aaKnown RBP6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 DPM3Q9P2X0 92 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 SLC7A11Q9UPY5 501 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 ARL2BPQ9Y2Y0 163 aa6.18□□□□□ -1.42
SMCHD1-210ENST00000583800 DYNC2H1Q8NCM8 4307 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 PSMB11A5LHX3 300 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 ZNF670-ZNF695F2Z2N8 137 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 SIRPB1O00241 398 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 MGST3O14880 152 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 SYT7O43581 403 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 ENTPD6O75354 484 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 GATBO75879 557 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 IGLV1-47P01700 117 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 ANXA8P13928 327 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 BCL3P20749 454 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 CDK2P24941 298 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 OR3A1P47881 315 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 NPBWR2P48146 333 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 POU3F4P49335 361 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 THBS3P49746 956 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 ZNF134P52741 427 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 CRISP1P54107 249 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 P2RX3P56373 397 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 RPL23AP62750 156 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 BDH1Q02338 343 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 HLA-DRB5Q30154 266 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 UTF1Q5T230 341 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 SLX4IPQ5VYV7 408 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 MEPCEQ7L2J0 689 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 ZNF329Q86UD4 541 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 YIPF7Q8N8F6 280 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 Q8NFD4 153 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 ZNF596Q8TC21 504 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 BORCS8Q96FH0 119 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 KIRREL1Q96J84 757 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 GPR61Q9BZJ8 451 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 CHST5Q9GZS9 411 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 ZNF286AQ9HBT8 521 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 CLN6Q9NWW5 311 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 HHLA2Q9UM44 414 aa6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 UBE2J1Q9Y385 318 aaPredicted RBP6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 HUWE1Q7Z6Z7 4374 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 EPPK1P58107 5090 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-210ENST00000583800 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 TRGV10A0A0A0MS01 117 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 TRBV2A0A0J9YWF9 115 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 LEUTXA8MZ59 168 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 B5MCH6 92 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 KRT8P05787 483 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 PRKACAP17612 351 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 ERP29P30040 261 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 ATP6V1E1P36543 226 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 OR3A4PP47883 348 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 GLIPR1P48060 266 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 MNAT1P51948 309 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 FUT6P51993 359 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 ARHGDIBP52566 201 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 ACTR3P61158 418 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 GNGT1P63211 74 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 RBM39Q14498 530 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms