RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 LSAMPQ13449 338 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 METAP1DQ6UB28 335 aaPredicted RBP16.74■□□□□ 0.27
SRSF1-206ENST00000583741 LINC00299Q6ZSB3 139 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 WDR86Q86TI4 376 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 LAX1Q8IWV1 398 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 C11orf53Q8IXP5 236 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 FAM216BQ8N7L0 139 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 SAMD12Q8N8I0 201 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 OR5H6Q8NGV6 325 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 TNFAIP8L1Q8WVP5 186 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 CCL13Q99616 98 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 DNAJB11Q9UBS4 358 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 ETV7Q9Y603 341 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 RNASEK-C17orf49H0YIS7 233 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.73■□□□□ 0.27
SRSF1-206ENST00000583741 HPGDSO60760 199 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 PTGFRP43088 359 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 POU3F4P49335 361 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 ZP1P60852 638 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 SPERTQ8NA61 448 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 SEH1LQ96EE3 360 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 S100A13Q99584 98 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 NOTCH3Q9UM47 2321 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 A0A1W2PRD5 423 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 A0A1W2PRF3 423 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 A0A1W2PRM7 423 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 BTBD17A6NE02 478 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 BPNT1O95861 308 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 PRB2P02812 416 aaPredicted RBP16.73■□□□□ 0.27
SRSF1-206ENST00000583741 TMEM225BP0DP42 221 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 KLRD1Q13241 179 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 C2orf76Q3KRA6 126 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 GLIPR1L1Q6UWM5 242 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 CALHM1Q8IU99 346 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 PNKDQ8N490 385 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 Q8N7P7 452 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 LRRC29Q8WV35 223 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 CEP19Q96LK0 163 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 MIXL1Q9H2W2 232 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 C14orf119Q9NWQ9 140 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 ADAM30Q9UKF2 790 aa16.73■□□□□ 0.27
SRSF1-206ENST00000583741 NPFFO15130 113 aa16.72■□□□□ 0.27
SRSF1-206ENST00000583741 UBBP0CG47 229 aa16.72■□□□□ 0.27
SRSF1-206ENST00000583741 HAAOP46952 286 aa16.72■□□□□ 0.27
SRSF1-206ENST00000583741 MICBQ29980 383 aa16.72■□□□□ 0.27
SRSF1-206ENST00000583741 SLC35E4Q6ICL7 350 aa16.72■□□□□ 0.27
SRSF1-206ENST00000583741 ZNF573Q86YE8 665 aa16.72■□□□□ 0.27
SRSF1-206ENST00000583741 KCNK15Q9H427 330 aa16.72■□□□□ 0.27
SRSF1-206ENST00000583741 TMEM272A0A1B0GTI8 110 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 TMEM210A6NLX4 147 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 MUC1P15941 1255 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-206ENST00000583741 MZT1Q08AG7 82 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 PDZK1IP1Q13113 114 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 UBE2NLQ5JXB2 153 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 KPRPQ5T749 579 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-206ENST00000583741 Q6ZPA2 131 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 CMTM3Q96MX0 182 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 GHRLQ9UBU3 117 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 ING4Q9UNL4 249 aa16.71■□□□□ 0.27
SRSF1-206ENST00000583741 ANGPTL7O43827 346 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 APOA1P02647 267 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 SELLP14151 372 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 AMY2BP19961 511 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 TNFSF8P32971 234 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 GUCA2AQ02747 115 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 IKZF1Q13422 519 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 FAM76BQ5HYJ3 339 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 SAMD5Q5TGI4 173 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 WDR82Q6UXN9 313 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 TNFRSF14Q92956 283 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 PPA2Q9H2U2 334 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 OR51I2Q9H344 312 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 ELL3Q9HB65 397 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-206ENST00000583741 FBLN5Q9UBX5 448 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 SIGLEC9Q9Y336 463 aa16.7■□□□□ 0.26
SRSF1-206ENST00000583741 FAM25AB3EWG3 89 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 FAM25CB3EWG5 89 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 FAM25GB3EWG6 89 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 CYB5AP00167 134 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 OPN1MWP04001 364 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 EIF4EP06730 217 aaKnown RBP16.69■□□□□ 0.26
SRSF1-206ENST00000583741 OPN1MW2P0DN77 364 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 OPN1MW3P0DN78 364 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 VSIG8P0DPA2 414 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 ELK1P19419 428 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 SAA4P35542 130 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 SLC22A6Q4U2R8 563 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 HAGHLQ6PII5 290 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-206ENST00000583741 SLC25A26Q70HW3 274 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 OR2W3Q7Z3T1 314 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 CMTM4Q8IZR5 234 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 PXT1Q8NFP0 134 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 SLC25A38Q96DW6 304 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 DIRAS2Q96HU8 199 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 DCTN5Q9BTE1 182 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 PKIBQ9C010 78 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 CST11Q9H112 138 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 METTL9Q9H1A3 318 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 RHBDL2Q9NX52 303 aa16.69■□□□□ 0.26
SRSF1-206ENST00000583741 J3QT63 122 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms